Strain Fitness in Variovorax sp. SCN45 around GFF4112

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
14,409	-		GFF4111	0.41	-0.0
14,579	+		GFF4111	0.61	-0.3
14,579	+		GFF4111	0.61	-1.3
14,580	-		GFF4111	0.61	-1.3
14,996	+				-1.4
15,002	+				-0.6
16,373	-		GFF4112	0.82	-0.8
16,713	-				+0.0
16,862	-				-0.0
16,862	-				+0.0
16,862	-				+0.3
17,452	+		GFF4113	0.47	-0.9
17,452	+		GFF4113	0.47	-0.0
17,452	+		GFF4113	0.47	-0.1
17,503	+		GFF4113	0.51	-0.1