Strain Fitness in Variovorax sp. SCN45 around GFF4103

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
4,645	+		GFF4102	0.61	-0.3
4,646	-		GFF4102	0.61	+0.7
4,646	-		GFF4102	0.61	+0.3
4,646	-		GFF4102	0.61	-0.6
5,666	+		GFF4103	0.10	-0.6
5,820	-		GFF4103	0.18	-0.1
6,072	-		GFF4103	0.29	-1.7
6,662	+		GFF4103	0.57	-0.0
6,663	-		GFF4103	0.57	-0.1
6,929	+		GFF4103	0.69	+1.7
6,929	+		GFF4103	0.69	+0.6
6,963	-		GFF4103	0.71	-1.8
7,067	+		GFF4103	0.75	-0.7
8,194	-		GFF4104	0.47	-2.3
8,194	-		GFF4104	0.47	-0.6
8,365	-		GFF4104	0.61	-0.2
8,365	-		GFF4104	0.61	-0.6
8,485	-		GFF4104	0.71	+0.4