Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2460 and GFF2461 are separated by 17 nucleotides GFF2461 and GFF2462 overlap by 4 nucleotides GFF2462 and GFF2463 are separated by 21 nucleotides GFF2463 and GFF2464 overlap by 4 nucleotides
GFF2460 - Heavy metal RND efflux outer membrane protein, CzcC family, at 518,729 to 520,042
GFF2460
GFF2461 - no description, at 520,060 to 520,491
GFF2461
GFF2462 - Mg(2+) transport ATPase, P-type (EC 3.6.3.2), at 520,488 to 523,253
GFF2462
GFF2463 - Response regulator BaeR, at 523,275 to 523,973
GFF2463
GFF2464 - Sensory histidine kinase BaeS, at 523,970 to 525,730
GFF2464
Position (kb) 520
521
522
523
524 Strain fitness (log2 ratio) -2
-1
0
1 at 519.579 kb on - strand, within GFF2460 at 519.798 kb on - strand, within GFF2460 at 519.956 kb on + strand at 520.187 kb on - strand, within GFF2461 at 520.797 kb on + strand, within GFF2462 at 520.797 kb on + strand, within GFF2462 at 520.798 kb on - strand, within GFF2462 at 520.798 kb on - strand, within GFF2462 at 520.798 kb on - strand, within GFF2462 at 520.798 kb on - strand, within GFF2462 at 520.845 kb on + strand, within GFF2462 at 520.846 kb on - strand, within GFF2462 at 520.846 kb on - strand, within GFF2462 at 520.846 kb on - strand, within GFF2462 at 521.766 kb on + strand, within GFF2462 at 521.766 kb on + strand, within GFF2462 at 521.779 kb on - strand, within GFF2462 at 521.779 kb on - strand, within GFF2462 at 522.174 kb on + strand, within GFF2462 at 522.434 kb on - strand, within GFF2462 at 522.648 kb on + strand, within GFF2462 at 522.648 kb on + strand, within GFF2462 at 522.649 kb on - strand, within GFF2462 at 522.649 kb on - strand, within GFF2462 at 522.766 kb on - strand, within GFF2462 at 523.162 kb on - strand at 523.195 kb on - strand at 523.227 kb on + strand at 523.681 kb on + strand, within GFF2463 at 523.682 kb on - strand, within GFF2463 at 523.915 kb on + strand at 523.916 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 519,579 - GFF2460 0.65 -0.7 519,798 - GFF2460 0.81 -2.2 519,956 + +0.6 520,187 - GFF2461 0.29 -0.4 520,797 + GFF2462 0.11 +1.7 520,797 + GFF2462 0.11 -0.9 520,798 - GFF2462 0.11 +0.2 520,798 - GFF2462 0.11 -0.3 520,798 - GFF2462 0.11 -0.1 520,798 - GFF2462 0.11 -0.1 520,845 + GFF2462 0.13 +0.2 520,846 - GFF2462 0.13 -0.5 520,846 - GFF2462 0.13 +1.4 520,846 - GFF2462 0.13 +0.1 521,766 + GFF2462 0.46 -0.2 521,766 + GFF2462 0.46 -0.2 521,779 - GFF2462 0.47 -0.3 521,779 - GFF2462 0.47 +0.2 522,174 + GFF2462 0.61 +0.7 522,434 - GFF2462 0.70 -0.2 522,648 + GFF2462 0.78 +0.0 522,648 + GFF2462 0.78 -1.1 522,649 - GFF2462 0.78 +0.4 522,649 - GFF2462 0.78 +0.3 522,766 - GFF2462 0.82 +0.7 523,162 - -1.3 523,195 - -1.0 523,227 + -0.1 523,681 + GFF2463 0.58 +0.1 523,682 - GFF2463 0.58 +0.4 523,915 + -1.8 523,916 - -0.1
Or see this region's nucleotide sequence