Strain Fitness in Variovorax sp. SCN45 around GFF2397

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
447,284	+		GFF2396	0.80	-0.4
447,284	+		GFF2396	0.80	-0.3
447,528	-				-0.4
447,684	-				-0.6
447,684	-				-0.5
447,783	+				-0.5
447,784	-				-0.6
447,784	-				+0.0
448,034	-		GFF2397	0.16	-0.7
448,368	+		GFF2397	0.36	-2.6
448,579	+		GFF2397	0.48	+1.7
448,580	-		GFF2397	0.48	-0.6
448,780	+		GFF2397	0.60	-2.1
448,928	-		GFF2397	0.69	-0.8
448,943	-		GFF2397	0.70	-1.6
449,297	-				-0.3