Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1934 and GFF1935 are separated by 172 nucleotides GFF1935 and GFF1936 are separated by 34 nucleotides GFF1936 and GFF1937 are separated by 23 nucleotides
GFF1934 - Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1), at 627,232 to 628,638
GFF1934
GFF1935 - GNAT family acetyltransferase PA5433, at 628,811 to 629,524
GFF1935
GFF1936 - Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41), at 629,559 to 630,404
GFF1936
GFF1937 - Hemolysins and related proteins containing CBS domains, at 630,428 to 631,741
GFF1937
Position (kb) 629
630
631 Strain fitness (log2 ratio) -1
0
1 at 628.758 kb on + strand at 628.759 kb on - strand at 628.763 kb on + strand at 628.763 kb on + strand at 628.763 kb on + strand at 628.763 kb on + strand at 628.763 kb on + strand at 628.763 kb on + strand at 628.763 kb on + strand at 628.763 kb on + strand at 628.763 kb on + strand at 628.763 kb on + strand at 628.763 kb on + strand at 628.764 kb on - strand at 628.764 kb on - strand at 628.764 kb on - strand at 629.000 kb on + strand, within GFF1935 at 629.001 kb on - strand, within GFF1935 at 629.001 kb on - strand, within GFF1935 at 629.046 kb on - strand, within GFF1935 at 629.046 kb on - strand, within GFF1935 at 629.228 kb on + strand, within GFF1935 at 629.339 kb on + strand, within GFF1935 at 629.339 kb on + strand, within GFF1935 at 629.339 kb on + strand, within GFF1935 at 629.340 kb on - strand, within GFF1935 at 629.369 kb on + strand, within GFF1935 at 629.369 kb on + strand, within GFF1935 at 629.370 kb on - strand, within GFF1935 at 629.370 kb on - strand, within GFF1935 at 629.561 kb on - strand at 629.561 kb on - strand at 629.779 kb on + strand, within GFF1936 at 629.780 kb on - strand, within GFF1936 at 629.780 kb on - strand, within GFF1936 at 629.780 kb on - strand, within GFF1936 at 629.780 kb on - strand, within GFF1936 at 629.933 kb on - strand, within GFF1936 at 630.395 kb on - strand at 630.806 kb on + strand, within GFF1937 at 631.297 kb on - strand, within GFF1937
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 628,758 + +0.2 628,759 - -0.0 628,763 + +0.4 628,763 + -1.3 628,763 + -0.1 628,763 + -0.6 628,763 + -0.7 628,763 + +0.4 628,763 + +0.4 628,763 + -1.3 628,763 + -1.0 628,763 + -0.9 628,763 + +0.5 628,764 - +0.8 628,764 - -0.4 628,764 - -0.7 629,000 + GFF1935 0.26 -1.1 629,001 - GFF1935 0.27 -0.7 629,001 - GFF1935 0.27 -0.0 629,046 - GFF1935 0.33 -0.1 629,046 - GFF1935 0.33 -0.7 629,228 + GFF1935 0.58 -1.7 629,339 + GFF1935 0.74 -1.2 629,339 + GFF1935 0.74 +0.1 629,339 + GFF1935 0.74 -0.4 629,340 - GFF1935 0.74 -0.0 629,369 + GFF1935 0.78 -0.2 629,369 + GFF1935 0.78 -0.8 629,370 - GFF1935 0.78 -0.5 629,370 - GFF1935 0.78 +1.5 629,561 - -0.9 629,561 - +1.0 629,779 + GFF1936 0.26 -0.3 629,780 - GFF1936 0.26 -0.7 629,780 - GFF1936 0.26 -1.2 629,780 - GFF1936 0.26 -0.1 629,780 - GFF1936 0.26 +0.2 629,933 - GFF1936 0.44 -0.9 630,395 - -0.2 630,806 + GFF1937 0.29 -0.4 631,297 - GFF1937 0.66 +0.2
Or see this region's nucleotide sequence