Strain Fitness in Variovorax sp. SCN45 around GFF1621

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
219,967	+		GFF1620	0.83	+0.4
219,968	-		GFF1620	0.83	-0.5
220,044	-		GFF1620	0.86	-0.8
220,744	+		GFF1621	0.12	-0.5
220,744	+		GFF1621	0.12	+0.0
220,784	-		GFF1621	0.15	-0.1
221,164	+		GFF1621	0.41	+0.3
221,164	+		GFF1621	0.41	-0.4
221,263	+		GFF1621	0.48	+0.2
221,585	-		GFF1621	0.71	+0.1
221,914	-				+0.2
223,003	-		GFF1622	0.79	+2.0