Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1353 and GFF1354 are separated by 14 nucleotides GFF1354 and GFF1355 are separated by 138 nucleotides
GFF1353 - Short-chain dehydrogenase/reductase SDR, at 696,423 to 697,328
GFF1353
GFF1354 - FMN-dependent NADH-azoreductase (EC 1.7.1.6), at 697,343 to 698,014
GFF1354
GFF1355 - Transcriptional regulator, LysR family, at 698,153 to 699,058
GFF1355
Position (kb) 697
698
699 Strain fitness (log2 ratio) -1
0
1
2 at 696.367 kb on + strand at 696.375 kb on + strand at 696.376 kb on - strand at 696.376 kb on - strand at 696.840 kb on + strand, within GFF1353 at 696.841 kb on - strand, within GFF1353 at 696.906 kb on + strand, within GFF1353 at 696.906 kb on + strand, within GFF1353 at 696.906 kb on + strand, within GFF1353 at 696.907 kb on - strand, within GFF1353 at 696.907 kb on - strand, within GFF1353 at 696.907 kb on - strand, within GFF1353 at 696.907 kb on - strand, within GFF1353 at 696.907 kb on - strand, within GFF1353 at 696.951 kb on + strand, within GFF1353 at 696.951 kb on + strand, within GFF1353 at 696.952 kb on - strand, within GFF1353 at 696.952 kb on - strand, within GFF1353 at 697.005 kb on + strand, within GFF1353 at 697.049 kb on + strand, within GFF1353 at 697.049 kb on + strand, within GFF1353 at 697.049 kb on + strand, within GFF1353 at 697.188 kb on + strand, within GFF1353 at 697.188 kb on + strand, within GFF1353 at 697.189 kb on - strand, within GFF1353 at 697.189 kb on - strand, within GFF1353 at 697.189 kb on - strand, within GFF1353 at 697.189 kb on - strand, within GFF1353 at 697.571 kb on + strand, within GFF1354 at 697.572 kb on - strand, within GFF1354 at 697.572 kb on - strand, within GFF1354 at 697.608 kb on + strand, within GFF1354 at 697.608 kb on + strand, within GFF1354 at 697.609 kb on - strand, within GFF1354 at 697.609 kb on - strand, within GFF1354 at 697.609 kb on - strand, within GFF1354 at 697.609 kb on - strand, within GFF1354 at 697.609 kb on - strand, within GFF1354 at 697.609 kb on - strand, within GFF1354 at 697.609 kb on - strand, within GFF1354 at 697.704 kb on + strand, within GFF1354 at 697.704 kb on + strand, within GFF1354 at 697.704 kb on + strand, within GFF1354 at 697.704 kb on + strand, within GFF1354 at 697.704 kb on + strand, within GFF1354 at 697.704 kb on + strand, within GFF1354 at 697.705 kb on - strand, within GFF1354 at 697.705 kb on - strand, within GFF1354 at 697.705 kb on - strand, within GFF1354 at 697.705 kb on - strand, within GFF1354 at 697.705 kb on - strand, within GFF1354 at 697.816 kb on - strand, within GFF1354 at 697.816 kb on - strand, within GFF1354 at 698.055 kb on + strand at 698.055 kb on + strand at 698.055 kb on + strand at 698.056 kb on - strand at 698.056 kb on - strand at 698.056 kb on - strand at 698.056 kb on - strand at 698.056 kb on - strand at 698.089 kb on + strand at 698.089 kb on + strand at 698.089 kb on + strand at 698.089 kb on + strand at 698.089 kb on + strand at 698.089 kb on + strand at 698.090 kb on - strand at 698.090 kb on - strand at 698.090 kb on - strand at 698.960 kb on + strand, within GFF1355 at 698.961 kb on - strand, within GFF1355 at 698.961 kb on - strand, within GFF1355 at 698.961 kb on - strand, within GFF1355
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 696,367 + +0.4 696,375 + -1.3 696,376 - -0.2 696,376 - +0.3 696,840 + GFF1353 0.46 -0.0 696,841 - GFF1353 0.46 +1.0 696,906 + GFF1353 0.53 -0.1 696,906 + GFF1353 0.53 -0.6 696,906 + GFF1353 0.53 +0.0 696,907 - GFF1353 0.53 -1.6 696,907 - GFF1353 0.53 -0.0 696,907 - GFF1353 0.53 +1.5 696,907 - GFF1353 0.53 +0.4 696,907 - GFF1353 0.53 -0.4 696,951 + GFF1353 0.58 +0.9 696,951 + GFF1353 0.58 +1.6 696,952 - GFF1353 0.58 -0.3 696,952 - GFF1353 0.58 -0.2 697,005 + GFF1353 0.64 -0.6 697,049 + GFF1353 0.69 +0.7 697,049 + GFF1353 0.69 -0.3 697,049 + GFF1353 0.69 +1.0 697,188 + GFF1353 0.84 -0.4 697,188 + GFF1353 0.84 -0.1 697,189 - GFF1353 0.85 -1.0 697,189 - GFF1353 0.85 -0.5 697,189 - GFF1353 0.85 +0.4 697,189 - GFF1353 0.85 +0.0 697,571 + GFF1354 0.34 -0.4 697,572 - GFF1354 0.34 +0.2 697,572 - GFF1354 0.34 +0.8 697,608 + GFF1354 0.39 +1.0 697,608 + GFF1354 0.39 +0.4 697,609 - GFF1354 0.40 -0.3 697,609 - GFF1354 0.40 -0.7 697,609 - GFF1354 0.40 +0.0 697,609 - GFF1354 0.40 -1.0 697,609 - GFF1354 0.40 -1.2 697,609 - GFF1354 0.40 +1.1 697,609 - GFF1354 0.40 -0.2 697,704 + GFF1354 0.54 -0.6 697,704 + GFF1354 0.54 +0.5 697,704 + GFF1354 0.54 +0.2 697,704 + GFF1354 0.54 +0.2 697,704 + GFF1354 0.54 -0.6 697,704 + GFF1354 0.54 -1.1 697,705 - GFF1354 0.54 +0.2 697,705 - GFF1354 0.54 -0.1 697,705 - GFF1354 0.54 -0.1 697,705 - GFF1354 0.54 +0.7 697,705 - GFF1354 0.54 +1.9 697,816 - GFF1354 0.70 +0.4 697,816 - GFF1354 0.70 -0.8 698,055 + +0.4 698,055 + -0.0 698,055 + +0.4 698,056 - -0.5 698,056 - -0.8 698,056 - -0.4 698,056 - -0.3 698,056 - -0.1 698,089 + +0.0 698,089 + -1.5 698,089 + +0.2 698,089 + -0.2 698,089 + -1.0 698,089 + -0.5 698,090 - +0.4 698,090 - +0.4 698,090 - -0.9 698,960 + GFF1355 0.89 -0.5 698,961 - GFF1355 0.89 -0.3 698,961 - GFF1355 0.89 +0.2 698,961 - GFF1355 0.89 +0.8
Or see this region's nucleotide sequence