Experiment: N-acetylneuraminic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS02700 and ABI39_RS02705 are separated by 31 nucleotides ABI39_RS02705 and ABI39_RS02710 are separated by 77 nucleotides ABI39_RS02710 and ABI39_RS02715 overlap by 17 nucleotides
ABI39_RS02700: ABI39_RS02700 - dihydropteroate synthase, at 785,033 to 785,890
_RS02700
ABI39_RS02705: ABI39_RS02705 - diadenylate cyclase CdaA, at 785,922 to 786,686
_RS02705
ABI39_RS02710: ABI39_RS02710 - GNAT family N-acetyltransferase, at 786,764 to 787,774
_RS02710
ABI39_RS02715: ABI39_RS02715 - DUF2156 domain-containing protein, at 787,758 to 788,660
_RS02715
Position (kb) 786
787
788 Strain fitness (log2 ratio) -2
-1
0
1 at 786.725 kb on + strand at 786.744 kb on + strand at 786.745 kb on - strand at 786.745 kb on - strand at 786.787 kb on - strand at 786.832 kb on + strand at 786.935 kb on - strand, within ABI39_RS02710 at 786.938 kb on + strand, within ABI39_RS02710 at 786.938 kb on + strand, within ABI39_RS02710 at 786.938 kb on + strand, within ABI39_RS02710 at 786.939 kb on - strand, within ABI39_RS02710 at 786.939 kb on - strand, within ABI39_RS02710 at 786.942 kb on + strand, within ABI39_RS02710 at 786.943 kb on - strand, within ABI39_RS02710 at 786.943 kb on - strand, within ABI39_RS02710 at 786.964 kb on + strand, within ABI39_RS02710 at 787.046 kb on - strand, within ABI39_RS02710 at 787.071 kb on + strand, within ABI39_RS02710 at 787.073 kb on + strand, within ABI39_RS02710 at 787.073 kb on + strand, within ABI39_RS02710 at 787.073 kb on + strand, within ABI39_RS02710 at 787.074 kb on - strand, within ABI39_RS02710 at 787.074 kb on - strand, within ABI39_RS02710 at 787.074 kb on - strand, within ABI39_RS02710 at 787.074 kb on - strand, within ABI39_RS02710 at 787.074 kb on - strand, within ABI39_RS02710 at 787.076 kb on - strand, within ABI39_RS02710 at 787.094 kb on + strand, within ABI39_RS02710 at 787.139 kb on - strand, within ABI39_RS02710 at 787.140 kb on + strand, within ABI39_RS02710 at 787.140 kb on + strand, within ABI39_RS02710 at 787.140 kb on + strand, within ABI39_RS02710 at 787.143 kb on - strand, within ABI39_RS02710 at 787.143 kb on - strand, within ABI39_RS02710 at 787.229 kb on + strand, within ABI39_RS02710 at 787.242 kb on - strand, within ABI39_RS02710 at 787.261 kb on + strand, within ABI39_RS02710 at 787.575 kb on - strand, within ABI39_RS02710 at 787.578 kb on + strand, within ABI39_RS02710 at 787.586 kb on - strand, within ABI39_RS02710 at 787.623 kb on - strand, within ABI39_RS02710 at 787.623 kb on - strand, within ABI39_RS02710 at 787.642 kb on + strand, within ABI39_RS02710 at 787.787 kb on + strand at 787.787 kb on + strand at 787.875 kb on + strand, within ABI39_RS02715 at 787.877 kb on + strand, within ABI39_RS02715 at 787.877 kb on + strand, within ABI39_RS02715 at 787.879 kb on + strand, within ABI39_RS02715 at 787.880 kb on - strand, within ABI39_RS02715 at 787.910 kb on - strand, within ABI39_RS02715 at 787.910 kb on - strand, within ABI39_RS02715 at 787.913 kb on + strand, within ABI39_RS02715 at 787.996 kb on + strand, within ABI39_RS02715 at 788.000 kb on + strand, within ABI39_RS02715 at 788.123 kb on + strand, within ABI39_RS02715 at 788.191 kb on + strand, within ABI39_RS02715 at 788.235 kb on - strand, within ABI39_RS02715 at 788.350 kb on - strand, within ABI39_RS02715 at 788.350 kb on - strand, within ABI39_RS02715 at 788.470 kb on + strand, within ABI39_RS02715 at 788.509 kb on + strand, within ABI39_RS02715 at 788.510 kb on - strand, within ABI39_RS02715 at 788.527 kb on + strand, within ABI39_RS02715 at 788.617 kb on - strand at 788.641 kb on - strand at 788.648 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction N-acetylneuraminic (C) remove 786,725 + +0.7 786,744 + +0.4 786,745 - +0.0 786,745 - -0.1 786,787 - -0.0 786,832 + -0.2 786,935 - ABI39_RS02710 0.17 -0.3 786,938 + ABI39_RS02710 0.17 -0.2 786,938 + ABI39_RS02710 0.17 -0.6 786,938 + ABI39_RS02710 0.17 -2.4 786,939 - ABI39_RS02710 0.17 -0.5 786,939 - ABI39_RS02710 0.17 -0.6 786,942 + ABI39_RS02710 0.18 -0.8 786,943 - ABI39_RS02710 0.18 -0.8 786,943 - ABI39_RS02710 0.18 -2.1 786,964 + ABI39_RS02710 0.20 -0.4 787,046 - ABI39_RS02710 0.28 -0.4 787,071 + ABI39_RS02710 0.30 -1.1 787,073 + ABI39_RS02710 0.31 -0.5 787,073 + ABI39_RS02710 0.31 -0.2 787,073 + ABI39_RS02710 0.31 +0.0 787,074 - ABI39_RS02710 0.31 -0.6 787,074 - ABI39_RS02710 0.31 -0.2 787,074 - ABI39_RS02710 0.31 -0.2 787,074 - ABI39_RS02710 0.31 -1.0 787,074 - ABI39_RS02710 0.31 -0.8 787,076 - ABI39_RS02710 0.31 -0.3 787,094 + ABI39_RS02710 0.33 -1.0 787,139 - ABI39_RS02710 0.37 -1.5 787,140 + ABI39_RS02710 0.37 -1.4 787,140 + ABI39_RS02710 0.37 -0.3 787,140 + ABI39_RS02710 0.37 -1.0 787,143 - ABI39_RS02710 0.37 -0.3 787,143 - ABI39_RS02710 0.37 +0.2 787,229 + ABI39_RS02710 0.46 -1.7 787,242 - ABI39_RS02710 0.47 -0.7 787,261 + ABI39_RS02710 0.49 -1.0 787,575 - ABI39_RS02710 0.80 +0.1 787,578 + ABI39_RS02710 0.81 +0.7 787,586 - ABI39_RS02710 0.81 -0.7 787,623 - ABI39_RS02710 0.85 -0.3 787,623 - ABI39_RS02710 0.85 -1.1 787,642 + ABI39_RS02710 0.87 -1.3 787,787 + -0.3 787,787 + +0.2 787,875 + ABI39_RS02715 0.13 -0.3 787,877 + ABI39_RS02715 0.13 -0.7 787,877 + ABI39_RS02715 0.13 +0.6 787,879 + ABI39_RS02715 0.13 +0.1 787,880 - ABI39_RS02715 0.14 +0.1 787,910 - ABI39_RS02715 0.17 +0.2 787,910 - ABI39_RS02715 0.17 +0.0 787,913 + ABI39_RS02715 0.17 -0.0 787,996 + ABI39_RS02715 0.26 -0.9 788,000 + ABI39_RS02715 0.27 +0.0 788,123 + ABI39_RS02715 0.40 +0.2 788,191 + ABI39_RS02715 0.48 -0.5 788,235 - ABI39_RS02715 0.53 +0.7 788,350 - ABI39_RS02715 0.66 -1.8 788,350 - ABI39_RS02715 0.66 +1.0 788,470 + ABI39_RS02715 0.79 -0.2 788,509 + ABI39_RS02715 0.83 +0.6 788,510 - ABI39_RS02715 0.83 +0.1 788,527 + ABI39_RS02715 0.85 +0.5 788,617 - +0.1 788,641 - +0.5 788,648 + +0.1
Or see this region's nucleotide sequence