Strain Fitness in Variovorax sp. SCN45 around GFF6010

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
68,887	+		GFF6009	0.23	-0.5
68,887	+		GFF6009	0.23	-0.2
68,887	+		GFF6009	0.23	-2.1
68,887	+		GFF6009	0.23	-0.5
68,888	-		GFF6009	0.23	+0.3
68,888	-		GFF6009	0.23	-1.0
68,888	-		GFF6009	0.23	-0.5
68,938	+		GFF6009	0.28	-0.3
69,055	+		GFF6009	0.38	+0.1
69,325	+		GFF6009	0.61	-0.7
69,325	+		GFF6009	0.61	+1.2
69,325	+		GFF6009	0.61	-0.1
69,326	-		GFF6009	0.61	+0.0
69,326	-		GFF6009	0.61	+0.1
69,416	-		GFF6009	0.69	-1.3
69,524	-		GFF6009	0.78	-0.2
69,586	+		GFF6009	0.83	+0.5
69,586	+		GFF6009	0.83	-0.3
69,587	-		GFF6009	0.83	-0.3
69,701	-				+0.9
69,701	-				-0.4
69,739	+				+0.5
69,739	+				+1.1
69,743	+				-0.5
69,744	-				-1.5
69,999	+		GFF6010	0.15	-0.3
70,000	-		GFF6010	0.15	-1.5
70,000	-		GFF6010	0.15	-0.3
70,000	-		GFF6010	0.15	+0.5
70,242	-		GFF6010	0.33	+0.1
70,242	-		GFF6010	0.33	-1.1
70,598	+		GFF6010	0.59	-0.5
70,805	+		GFF6010	0.74	-0.0
70,805	+		GFF6010	0.74	+0.2
70,914	-		GFF6010	0.82	-0.9
71,057	+				-0.6
71,057	+				-0.2
71,058	-				-0.1
71,122	+				+1.3
71,463	+		GFF6011	0.43	+0.3
71,497	-		GFF6011	0.48	-0.5
71,522	+		GFF6011	0.51	-0.3
71,523	-		GFF6011	0.51	-1.5
71,731	-		GFF6011	0.81	+0.3
71,873	-				-0.4
71,998	+				+0.5
71,998	+				-0.2
71,998	+				+1.0
71,999	-				+1.6
72,075	+				-0.4