Strain Fitness in Variovorax sp. SCN45 around GFF5725

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
93,131	+		GFF5723	0.78	-0.6
93,132	-		GFF5723	0.78	+0.3
93,132	-		GFF5723	0.78	+0.8
93,177	-		GFF5723	0.82	+0.0
93,185	+		GFF5723	0.83	+1.4
93,186	-		GFF5723	0.83	-0.0
93,300	-				-0.5
93,317	+				+0.1
93,980	-				-0.9
94,031	+				+0.4
94,258	-		GFF5725	0.15	+0.3
94,581	+		GFF5725	0.36	-0.5
95,127	-		GFF5725	0.71	-0.8
96,431	+		GFF5727	0.32	-0.6
96,431	+		GFF5727	0.32	-1.3
96,432	-		GFF5727	0.32	-2.3