Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5463 and GFF5464 overlap by 8 nucleotides GFF5464 and GFF5465 overlap by 4 nucleotides GFF5465 and GFF5466 are separated by 45 nucleotides GFF5466 and GFF5467 are separated by 140 nucleotides
GFF5463 - RidA/YER057c/UK114 superfamily protein, at 93,773 to 94,240
GFF5463
GFF5464 - Transcriptional regulator, AcrR family, at 94,233 to 94,919
GFF5464
GFF5465 - Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-), at 94,916 to 95,884
GFF5465
GFF5466 - NAD(P)H oxidoreductase YrkL @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2, at 95,930 to 96,520
GFF5466
GFF5467 - Hydroxymethylpyrimidine ABC transporter, substrate-binding component, at 96,661 to 97,689
GFF5467
Position (kb) 94
95
96 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 94.070 kb on + strand, within GFF5463 at 94.071 kb on - strand, within GFF5463 at 94.071 kb on - strand, within GFF5463 at 94.071 kb on - strand, within GFF5463 at 94.071 kb on - strand, within GFF5463 at 94.071 kb on - strand, within GFF5463 at 94.092 kb on - strand, within GFF5463 at 94.092 kb on - strand, within GFF5463 at 94.100 kb on + strand, within GFF5463 at 94.100 kb on + strand, within GFF5463 at 94.100 kb on + strand, within GFF5463 at 94.100 kb on + strand, within GFF5463 at 94.100 kb on + strand, within GFF5463 at 94.100 kb on + strand, within GFF5463 at 94.100 kb on + strand, within GFF5463 at 94.101 kb on - strand, within GFF5463 at 94.101 kb on - strand, within GFF5463 at 94.101 kb on - strand, within GFF5463 at 94.101 kb on - strand, within GFF5463 at 94.101 kb on - strand, within GFF5463 at 94.101 kb on - strand, within GFF5463 at 94.101 kb on - strand, within GFF5463 at 94.125 kb on - strand, within GFF5463 at 94.214 kb on + strand at 94.214 kb on + strand at 94.214 kb on + strand at 94.214 kb on + strand at 94.214 kb on + strand at 94.214 kb on + strand at 94.214 kb on + strand at 94.214 kb on + strand at 94.214 kb on + strand at 94.214 kb on + strand at 94.214 kb on + strand at 94.214 kb on + strand at 94.215 kb on - strand at 94.215 kb on - strand at 94.215 kb on - strand at 94.215 kb on - strand at 94.215 kb on - strand at 94.215 kb on - strand at 94.215 kb on - strand at 94.215 kb on - strand at 94.215 kb on - strand at 94.215 kb on - strand at 94.215 kb on - strand at 94.215 kb on - strand at 94.234 kb on + strand at 94.234 kb on + strand at 94.235 kb on - strand at 94.235 kb on - strand at 94.235 kb on - strand at 94.285 kb on + strand at 94.286 kb on - strand at 94.328 kb on - strand, within GFF5464 at 94.328 kb on - strand, within GFF5464 at 94.330 kb on + strand, within GFF5464 at 94.330 kb on + strand, within GFF5464 at 94.357 kb on + strand, within GFF5464 at 94.357 kb on + strand, within GFF5464 at 94.358 kb on - strand, within GFF5464 at 94.358 kb on - strand, within GFF5464 at 94.443 kb on + strand, within GFF5464 at 94.444 kb on - strand, within GFF5464 at 94.699 kb on + strand, within GFF5464 at 94.699 kb on + strand, within GFF5464 at 94.699 kb on + strand, within GFF5464 at 94.699 kb on + strand, within GFF5464 at 94.699 kb on + strand, within GFF5464 at 94.699 kb on + strand, within GFF5464 at 94.699 kb on + strand, within GFF5464 at 94.700 kb on - strand, within GFF5464 at 94.700 kb on - strand, within GFF5464 at 94.700 kb on - strand, within GFF5464 at 94.700 kb on - strand, within GFF5464 at 94.702 kb on + strand, within GFF5464 at 94.702 kb on + strand, within GFF5464 at 94.702 kb on + strand, within GFF5464 at 94.702 kb on + strand, within GFF5464 at 94.702 kb on + strand, within GFF5464 at 94.703 kb on - strand, within GFF5464 at 94.703 kb on - strand, within GFF5464 at 94.703 kb on - strand, within GFF5464 at 94.825 kb on + strand, within GFF5464 at 94.826 kb on - strand, within GFF5464 at 95.037 kb on - strand, within GFF5465 at 95.082 kb on + strand, within GFF5465 at 95.215 kb on - strand, within GFF5465 at 95.215 kb on - strand, within GFF5465 at 95.215 kb on - strand, within GFF5465 at 95.270 kb on + strand, within GFF5465 at 95.270 kb on + strand, within GFF5465 at 95.270 kb on + strand, within GFF5465 at 95.301 kb on + strand, within GFF5465 at 95.301 kb on + strand, within GFF5465 at 95.301 kb on + strand, within GFF5465 at 95.301 kb on + strand, within GFF5465 at 95.301 kb on + strand, within GFF5465 at 95.301 kb on + strand, within GFF5465 at 95.301 kb on + strand, within GFF5465 at 95.301 kb on + strand, within GFF5465 at 95.301 kb on + strand, within GFF5465 at 95.301 kb on + strand, within GFF5465 at 95.301 kb on + strand, within GFF5465 at 95.301 kb on + strand, within GFF5465 at 95.302 kb on - strand, within GFF5465 at 95.302 kb on - strand, within GFF5465 at 95.302 kb on - strand, within GFF5465 at 95.302 kb on - strand, within GFF5465 at 95.682 kb on + strand, within GFF5465 at 95.683 kb on - strand, within GFF5465 at 95.721 kb on + strand, within GFF5465 at 95.775 kb on + strand, within GFF5465 at 95.775 kb on + strand, within GFF5465 at 95.775 kb on + strand, within GFF5465 at 95.776 kb on - strand, within GFF5465 at 95.923 kb on + strand at 95.923 kb on + strand at 95.923 kb on + strand at 95.923 kb on + strand at 95.923 kb on + strand at 95.924 kb on - strand at 95.924 kb on - strand at 95.924 kb on - strand at 95.924 kb on - strand at 95.924 kb on - strand at 95.924 kb on - strand at 95.927 kb on + strand at 95.928 kb on - strand at 95.928 kb on - strand at 95.930 kb on + strand at 96.274 kb on - strand, within GFF5466 at 96.274 kb on - strand, within GFF5466 at 96.274 kb on - strand, within GFF5466 at 96.357 kb on + strand, within GFF5466 at 96.357 kb on + strand, within GFF5466 at 96.406 kb on - strand, within GFF5466 at 96.406 kb on - strand, within GFF5466 at 96.462 kb on + strand at 96.590 kb on - strand at 96.590 kb on - strand at 96.662 kb on + strand at 96.662 kb on + strand at 96.662 kb on + strand at 96.662 kb on + strand at 96.662 kb on + strand at 96.662 kb on + strand at 96.662 kb on + strand at 96.663 kb on - strand at 96.758 kb on + strand at 96.758 kb on + strand at 96.759 kb on - strand at 96.759 kb on - strand at 96.759 kb on - strand at 96.759 kb on - strand at 96.759 kb on - strand at 96.759 kb on - strand at 96.759 kb on - strand at 96.759 kb on - strand at 96.785 kb on + strand, within GFF5467 at 96.786 kb on - strand, within GFF5467
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 94,070 + GFF5463 0.63 +2.5 94,071 - GFF5463 0.64 -0.0 94,071 - GFF5463 0.64 +0.2 94,071 - GFF5463 0.64 -0.5 94,071 - GFF5463 0.64 -0.4 94,071 - GFF5463 0.64 -0.6 94,092 - GFF5463 0.68 -0.5 94,092 - GFF5463 0.68 -0.8 94,100 + GFF5463 0.70 +0.7 94,100 + GFF5463 0.70 -0.1 94,100 + GFF5463 0.70 +1.1 94,100 + GFF5463 0.70 +0.6 94,100 + GFF5463 0.70 +0.3 94,100 + GFF5463 0.70 -0.8 94,100 + GFF5463 0.70 +0.0 94,101 - GFF5463 0.70 -0.5 94,101 - GFF5463 0.70 -0.5 94,101 - GFF5463 0.70 -0.4 94,101 - GFF5463 0.70 -0.5 94,101 - GFF5463 0.70 -0.2 94,101 - GFF5463 0.70 +0.8 94,101 - GFF5463 0.70 -0.3 94,125 - GFF5463 0.75 +0.4 94,214 + -0.6 94,214 + +0.0 94,214 + -0.4 94,214 + +1.2 94,214 + +0.3 94,214 + +0.9 94,214 + -0.2 94,214 + +0.1 94,214 + -0.1 94,214 + -1.0 94,214 + +0.6 94,214 + +0.9 94,215 - +0.0 94,215 - -1.5 94,215 - +0.1 94,215 - -0.6 94,215 - +1.5 94,215 - -1.5 94,215 - -0.1 94,215 - +0.8 94,215 - -0.1 94,215 - -0.1 94,215 - +0.3 94,215 - -0.1 94,234 + -0.5 94,234 + +0.5 94,235 - +0.2 94,235 - -1.5 94,235 - -0.8 94,285 + -0.2 94,286 - -0.8 94,328 - GFF5464 0.14 +1.8 94,328 - GFF5464 0.14 +0.9 94,330 + GFF5464 0.14 +0.0 94,330 + GFF5464 0.14 +1.3 94,357 + GFF5464 0.18 -0.0 94,357 + GFF5464 0.18 -0.5 94,358 - GFF5464 0.18 +0.3 94,358 - GFF5464 0.18 +0.2 94,443 + GFF5464 0.31 +0.6 94,444 - GFF5464 0.31 +0.3 94,699 + GFF5464 0.68 -0.1 94,699 + GFF5464 0.68 +0.9 94,699 + GFF5464 0.68 -0.1 94,699 + GFF5464 0.68 +0.2 94,699 + GFF5464 0.68 -0.1 94,699 + GFF5464 0.68 +0.6 94,699 + GFF5464 0.68 +0.4 94,700 - GFF5464 0.68 +2.9 94,700 - GFF5464 0.68 -0.2 94,700 - GFF5464 0.68 +0.6 94,700 - GFF5464 0.68 +2.7 94,702 + GFF5464 0.68 +1.2 94,702 + GFF5464 0.68 +0.7 94,702 + GFF5464 0.68 +0.1 94,702 + GFF5464 0.68 +0.8 94,702 + GFF5464 0.68 +1.4 94,703 - GFF5464 0.68 +0.3 94,703 - GFF5464 0.68 +0.5 94,703 - GFF5464 0.68 +1.4 94,825 + GFF5464 0.86 +0.4 94,826 - GFF5464 0.86 -0.6 95,037 - GFF5465 0.12 +0.5 95,082 + GFF5465 0.17 +0.1 95,215 - GFF5465 0.31 +0.4 95,215 - GFF5465 0.31 +0.4 95,215 - GFF5465 0.31 +0.0 95,270 + GFF5465 0.37 -0.2 95,270 + GFF5465 0.37 -0.8 95,270 + GFF5465 0.37 +0.2 95,301 + GFF5465 0.40 -0.0 95,301 + GFF5465 0.40 +0.6 95,301 + GFF5465 0.40 +1.6 95,301 + GFF5465 0.40 -0.1 95,301 + GFF5465 0.40 +1.0 95,301 + GFF5465 0.40 +0.9 95,301 + GFF5465 0.40 -0.4 95,301 + GFF5465 0.40 +0.7 95,301 + GFF5465 0.40 +1.2 95,301 + GFF5465 0.40 +0.1 95,301 + GFF5465 0.40 +0.6 95,301 + GFF5465 0.40 +1.0 95,302 - GFF5465 0.40 -0.3 95,302 - GFF5465 0.40 -1.6 95,302 - GFF5465 0.40 +0.2 95,302 - GFF5465 0.40 +0.5 95,682 + GFF5465 0.79 +0.6 95,683 - GFF5465 0.79 +0.8 95,721 + GFF5465 0.83 -0.7 95,775 + GFF5465 0.89 -0.4 95,775 + GFF5465 0.89 +0.7 95,775 + GFF5465 0.89 +1.2 95,776 - GFF5465 0.89 +0.4 95,923 + -1.4 95,923 + -1.1 95,923 + -1.1 95,923 + +0.4 95,923 + -0.7 95,924 - -0.3 95,924 - -0.3 95,924 - +0.4 95,924 - +0.4 95,924 - +0.0 95,924 - +0.2 95,927 + +0.6 95,928 - +0.4 95,928 - -0.4 95,930 + -0.6 96,274 - GFF5466 0.58 -0.4 96,274 - GFF5466 0.58 -1.0 96,274 - GFF5466 0.58 -0.1 96,357 + GFF5466 0.72 -0.3 96,357 + GFF5466 0.72 +0.9 96,406 - GFF5466 0.81 -1.0 96,406 - GFF5466 0.81 +0.9 96,462 + -0.7 96,590 - +0.1 96,590 - +0.3 96,662 + +0.6 96,662 + +0.1 96,662 + -0.4 96,662 + -0.5 96,662 + -2.3 96,662 + -0.6 96,662 + -0.1 96,663 - +0.3 96,758 + +0.7 96,758 + -0.1 96,759 - -0.6 96,759 - +2.6 96,759 - +0.1 96,759 - +0.0 96,759 - +0.0 96,759 - +2.5 96,759 - +0.4 96,759 - -0.2 96,785 + GFF5467 0.12 -0.5 96,786 - GFF5467 0.12 -1.5
Or see this region's nucleotide sequence