Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4368 and GFF4369 are separated by 51 nucleotides GFF4369 and GFF4370 are separated by 110 nucleotides
GFF4368 - Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4), at 291,306 to 293,294
GFF4368
GFF4369 - no description, at 293,346 to 293,600
GFF4369
GFF4370 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 293,711 to 296,095
GFF4370
Position (kb) 293
294
295
296
297 Strain fitness (log2 ratio) -1
0
1 at 292.771 kb on + strand, within GFF4368 at 293.047 kb on + strand, within GFF4368 at 293.048 kb on - strand, within GFF4368 at 293.056 kb on + strand, within GFF4368 at 293.328 kb on + strand at 293.451 kb on + strand, within GFF4369 at 293.476 kb on + strand, within GFF4369 at 293.476 kb on + strand, within GFF4369 at 293.477 kb on - strand, within GFF4369 at 293.505 kb on - strand, within GFF4369 at 293.505 kb on - strand, within GFF4369 at 293.515 kb on + strand, within GFF4369 at 293.516 kb on - strand, within GFF4369 at 293.705 kb on - strand at 293.793 kb on - strand at 293.996 kb on + strand, within GFF4370 at 293.996 kb on + strand, within GFF4370 at 293.996 kb on - strand, within GFF4370 at 293.997 kb on - strand, within GFF4370 at 294.489 kb on - strand, within GFF4370 at 294.518 kb on + strand, within GFF4370 at 294.665 kb on - strand, within GFF4370 at 294.710 kb on + strand, within GFF4370 at 294.711 kb on - strand, within GFF4370 at 294.711 kb on - strand, within GFF4370 at 294.867 kb on - strand, within GFF4370 at 295.194 kb on - strand, within GFF4370 at 295.384 kb on - strand, within GFF4370 at 295.384 kb on - strand, within GFF4370 at 295.547 kb on + strand, within GFF4370 at 295.547 kb on + strand, within GFF4370 at 295.712 kb on + strand, within GFF4370 at 295.713 kb on - strand, within GFF4370 at 295.722 kb on + strand, within GFF4370 at 295.749 kb on - strand, within GFF4370 at 295.749 kb on - strand, within GFF4370
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 292,771 + GFF4368 0.74 -0.4 293,047 + GFF4368 0.88 +0.7 293,048 - GFF4368 0.88 +1.2 293,056 + GFF4368 0.88 +0.3 293,328 + +0.1 293,451 + GFF4369 0.41 +0.6 293,476 + GFF4369 0.51 +0.3 293,476 + GFF4369 0.51 -0.4 293,477 - GFF4369 0.51 +0.1 293,505 - GFF4369 0.62 -0.8 293,505 - GFF4369 0.62 +1.2 293,515 + GFF4369 0.66 +0.1 293,516 - GFF4369 0.67 -0.0 293,705 - -0.1 293,793 - -0.1 293,996 + GFF4370 0.12 -0.8 293,996 + GFF4370 0.12 -1.7 293,996 - GFF4370 0.12 +0.1 293,997 - GFF4370 0.12 -0.3 294,489 - GFF4370 0.33 -1.5 294,518 + GFF4370 0.34 +1.7 294,665 - GFF4370 0.40 -0.3 294,710 + GFF4370 0.42 -1.1 294,711 - GFF4370 0.42 -1.4 294,711 - GFF4370 0.42 -1.1 294,867 - GFF4370 0.48 -0.1 295,194 - GFF4370 0.62 -0.2 295,384 - GFF4370 0.70 -1.5 295,384 - GFF4370 0.70 +0.9 295,547 + GFF4370 0.77 -0.3 295,547 + GFF4370 0.77 -0.1 295,712 + GFF4370 0.84 -0.8 295,713 - GFF4370 0.84 -0.5 295,722 + GFF4370 0.84 +0.1 295,749 - GFF4370 0.85 -0.4 295,749 - GFF4370 0.85 -0.3
Or see this region's nucleotide sequence