Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4245 and GFF4246 are separated by 18 nucleotides GFF4246 and GFF4247 are separated by 41 nucleotides GFF4247 and GFF4248 are separated by 4 nucleotides
GFF4245 - Cytochrome c peroxidase (EC 1.11.1.5), at 160,327 to 161,706
GFF4245
GFF4246 - FIG00464377: hypothetical protein, at 161,725 to 162,369
GFF4246
GFF4247 - no description, at 162,411 to 163,082
GFF4247
GFF4248 - Similar to eukaryotic Peptidyl prolyl 4-hydroxylase, alpha subunit (EC 1.14.11.2), at 163,087 to 163,992
GFF4248
Position (kb) 161
162
163 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 160.804 kb on + strand, within GFF4245 at 160.805 kb on - strand, within GFF4245 at 160.924 kb on + strand, within GFF4245 at 160.924 kb on + strand, within GFF4245 at 160.925 kb on - strand, within GFF4245 at 160.936 kb on + strand, within GFF4245 at 160.936 kb on + strand, within GFF4245 at 160.936 kb on + strand, within GFF4245 at 160.936 kb on + strand, within GFF4245 at 160.936 kb on + strand, within GFF4245 at 160.937 kb on - strand, within GFF4245 at 160.937 kb on - strand, within GFF4245 at 160.937 kb on - strand, within GFF4245 at 160.937 kb on - strand, within GFF4245 at 160.937 kb on - strand, within GFF4245 at 160.945 kb on + strand, within GFF4245 at 160.945 kb on + strand, within GFF4245 at 160.945 kb on + strand, within GFF4245 at 160.945 kb on + strand, within GFF4245 at 160.945 kb on + strand, within GFF4245 at 160.945 kb on + strand, within GFF4245 at 160.946 kb on - strand, within GFF4245 at 160.946 kb on - strand, within GFF4245 at 160.946 kb on - strand, within GFF4245 at 160.946 kb on - strand, within GFF4245 at 161.045 kb on - strand, within GFF4245 at 161.095 kb on + strand, within GFF4245 at 161.095 kb on + strand, within GFF4245 at 161.096 kb on - strand, within GFF4245 at 161.096 kb on - strand, within GFF4245 at 161.096 kb on - strand, within GFF4245 at 161.217 kb on + strand, within GFF4245 at 161.217 kb on + strand, within GFF4245 at 161.217 kb on + strand, within GFF4245 at 161.217 kb on + strand, within GFF4245 at 161.217 kb on + strand, within GFF4245 at 161.218 kb on - strand, within GFF4245 at 161.218 kb on - strand, within GFF4245 at 161.218 kb on - strand, within GFF4245 at 161.218 kb on - strand, within GFF4245 at 161.218 kb on - strand, within GFF4245 at 161.248 kb on + strand, within GFF4245 at 161.249 kb on - strand, within GFF4245 at 161.350 kb on + strand, within GFF4245 at 161.351 kb on - strand, within GFF4245 at 161.351 kb on - strand, within GFF4245 at 161.351 kb on - strand, within GFF4245 at 161.351 kb on - strand, within GFF4245 at 161.383 kb on + strand, within GFF4245 at 161.476 kb on + strand, within GFF4245 at 161.476 kb on + strand, within GFF4245 at 161.477 kb on - strand, within GFF4245 at 161.477 kb on - strand, within GFF4245 at 161.477 kb on - strand, within GFF4245 at 161.659 kb on + strand at 161.660 kb on - strand at 161.870 kb on - strand, within GFF4246 at 161.870 kb on - strand, within GFF4246 at 161.870 kb on - strand, within GFF4246 at 161.905 kb on + strand, within GFF4246 at 161.905 kb on + strand, within GFF4246 at 161.905 kb on + strand, within GFF4246 at 161.905 kb on + strand, within GFF4246 at 161.905 kb on + strand, within GFF4246 at 161.906 kb on - strand, within GFF4246 at 162.055 kb on + strand, within GFF4246 at 162.055 kb on + strand, within GFF4246 at 162.055 kb on + strand, within GFF4246 at 162.055 kb on + strand, within GFF4246 at 162.056 kb on - strand, within GFF4246 at 162.058 kb on + strand, within GFF4246 at 162.058 kb on + strand, within GFF4246 at 162.058 kb on + strand, within GFF4246 at 162.058 kb on + strand, within GFF4246 at 162.058 kb on + strand, within GFF4246 at 162.212 kb on - strand, within GFF4246 at 162.798 kb on + strand, within GFF4247 at 162.798 kb on + strand, within GFF4247 at 162.798 kb on + strand, within GFF4247 at 162.799 kb on - strand, within GFF4247 at 162.918 kb on + strand, within GFF4247 at 162.919 kb on - strand, within GFF4247 at 162.919 kb on - strand, within GFF4247 at 162.919 kb on - strand, within GFF4247 at 162.919 kb on - strand, within GFF4247 at 162.919 kb on - strand, within GFF4247 at 162.924 kb on + strand, within GFF4247 at 162.925 kb on - strand, within GFF4247 at 162.925 kb on - strand, within GFF4247 at 162.925 kb on - strand, within GFF4247 at 163.100 kb on + strand at 163.101 kb on - strand at 163.231 kb on + strand, within GFF4248 at 163.231 kb on + strand, within GFF4248 at 163.231 kb on + strand, within GFF4248 at 163.232 kb on - strand, within GFF4248 at 163.232 kb on - strand, within GFF4248 at 163.232 kb on - strand, within GFF4248 at 163.232 kb on - strand, within GFF4248 at 163.232 kb on - strand, within GFF4248
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 160,804 + GFF4245 0.35 -0.1 160,805 - GFF4245 0.35 -1.0 160,924 + GFF4245 0.43 +0.4 160,924 + GFF4245 0.43 -0.3 160,925 - GFF4245 0.43 -2.8 160,936 + GFF4245 0.44 +0.4 160,936 + GFF4245 0.44 +0.8 160,936 + GFF4245 0.44 +1.3 160,936 + GFF4245 0.44 -0.1 160,936 + GFF4245 0.44 -0.8 160,937 - GFF4245 0.44 +0.0 160,937 - GFF4245 0.44 -0.8 160,937 - GFF4245 0.44 -0.5 160,937 - GFF4245 0.44 +0.0 160,937 - GFF4245 0.44 -1.2 160,945 + GFF4245 0.45 -0.3 160,945 + GFF4245 0.45 -0.3 160,945 + GFF4245 0.45 -0.9 160,945 + GFF4245 0.45 +1.7 160,945 + GFF4245 0.45 +0.0 160,945 + GFF4245 0.45 +0.9 160,946 - GFF4245 0.45 -0.2 160,946 - GFF4245 0.45 -0.2 160,946 - GFF4245 0.45 -0.2 160,946 - GFF4245 0.45 -0.3 161,045 - GFF4245 0.52 -1.1 161,095 + GFF4245 0.56 +1.1 161,095 + GFF4245 0.56 +4.0 161,096 - GFF4245 0.56 +0.0 161,096 - GFF4245 0.56 -0.7 161,096 - GFF4245 0.56 -0.6 161,217 + GFF4245 0.64 -0.2 161,217 + GFF4245 0.64 -0.2 161,217 + GFF4245 0.64 +0.8 161,217 + GFF4245 0.64 -0.2 161,217 + GFF4245 0.64 +0.1 161,218 - GFF4245 0.65 -0.2 161,218 - GFF4245 0.65 -0.7 161,218 - GFF4245 0.65 -0.2 161,218 - GFF4245 0.65 -0.2 161,218 - GFF4245 0.65 +0.3 161,248 + GFF4245 0.67 -1.8 161,249 - GFF4245 0.67 -0.9 161,350 + GFF4245 0.74 -1.3 161,351 - GFF4245 0.74 +0.3 161,351 - GFF4245 0.74 -0.1 161,351 - GFF4245 0.74 -0.9 161,351 - GFF4245 0.74 -1.1 161,383 + GFF4245 0.77 -0.2 161,476 + GFF4245 0.83 +1.1 161,476 + GFF4245 0.83 -0.4 161,477 - GFF4245 0.83 -0.3 161,477 - GFF4245 0.83 -1.7 161,477 - GFF4245 0.83 -0.5 161,659 + -0.2 161,660 - -1.6 161,870 - GFF4246 0.22 -0.7 161,870 - GFF4246 0.22 -1.3 161,870 - GFF4246 0.22 -0.2 161,905 + GFF4246 0.28 -2.2 161,905 + GFF4246 0.28 -0.9 161,905 + GFF4246 0.28 -0.5 161,905 + GFF4246 0.28 +0.2 161,905 + GFF4246 0.28 +1.7 161,906 - GFF4246 0.28 +0.7 162,055 + GFF4246 0.51 -0.2 162,055 + GFF4246 0.51 -0.3 162,055 + GFF4246 0.51 -0.6 162,055 + GFF4246 0.51 -0.9 162,056 - GFF4246 0.51 -1.2 162,058 + GFF4246 0.52 +0.4 162,058 + GFF4246 0.52 +1.4 162,058 + GFF4246 0.52 -2.3 162,058 + GFF4246 0.52 +0.0 162,058 + GFF4246 0.52 +2.0 162,212 - GFF4246 0.76 +0.7 162,798 + GFF4247 0.58 +0.1 162,798 + GFF4247 0.58 -1.1 162,798 + GFF4247 0.58 +0.0 162,799 - GFF4247 0.58 +0.2 162,918 + GFF4247 0.75 -0.6 162,919 - GFF4247 0.76 -0.9 162,919 - GFF4247 0.76 -0.5 162,919 - GFF4247 0.76 -0.5 162,919 - GFF4247 0.76 +0.5 162,919 - GFF4247 0.76 +0.4 162,924 + GFF4247 0.76 -0.5 162,925 - GFF4247 0.76 -0.3 162,925 - GFF4247 0.76 -1.4 162,925 - GFF4247 0.76 -1.1 163,100 + -0.4 163,101 - -0.2 163,231 + GFF4248 0.16 -0.0 163,231 + GFF4248 0.16 +0.1 163,231 + GFF4248 0.16 +1.3 163,232 - GFF4248 0.16 +0.2 163,232 - GFF4248 0.16 +0.4 163,232 - GFF4248 0.16 +0.2 163,232 - GFF4248 0.16 -0.4 163,232 - GFF4248 0.16 +0.1
Or see this region's nucleotide sequence