Strain Fitness in Variovorax sp. SCN45 around GFF3168

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
608,400	-		GFF3168	0.43	+0.3
608,904	-		GFF3168	0.78	+1.6
608,909	+		GFF3168	0.78	+1.6
609,528	+		GFF3169	0.19	-0.0
609,729	+		GFF3169	0.33	-1.5
609,729	+		GFF3169	0.33	-0.1
609,729	+		GFF3169	0.33	+0.4
609,730	-		GFF3169	0.33	-0.4
609,730	-		GFF3169	0.33	+0.1
609,799	-		GFF3169	0.37	-0.9
609,799	-		GFF3169	0.37	-0.8
609,861	+		GFF3169	0.41	-0.4
609,862	-		GFF3169	0.41	-1.2
610,060	+		GFF3169	0.54	-0.6
610,061	-		GFF3169	0.54	+0.5