Strain Fitness in Variovorax sp. SCN45 around GFF3130

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
558,287	+				-1.4
558,288	-				-0.2
559,079	+				+0.6
559,112	+				-0.5
559,113	-				+0.3
559,202	+		GFF3130	0.20	+0.4
559,202	+		GFF3130	0.20	+0.9
559,576	-				+0.8
559,603	-				-1.5
559,611	+				+0.0
559,650	+				-0.4
559,650	+				+0.9
559,651	-				+0.0
559,708	-				-0.7
559,933	-		GFF3131	0.12	-0.6
559,995	+		GFF3131	0.14	+0.2
559,995	+		GFF3131	0.14	+0.0
559,996	-		GFF3131	0.14	+2.2
559,996	-		GFF3131	0.14	-1.2
559,996	-		GFF3131	0.14	-0.6