Strain Fitness in Variovorax sp. SCN45 around GFF2654

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
72,876	+		GFF2653	0.47	-1.1
72,876	+		GFF2653	0.47	+0.0
72,876	+		GFF2653	0.47	+1.3
73,111	-		GFF2653	0.62	-0.3
73,152	+		GFF2653	0.64	+0.1
73,152	+		GFF2653	0.64	-1.4
73,152	+		GFF2653	0.64	+1.2
73,153	-		GFF2653	0.64	+0.3
73,153	-		GFF2653	0.64	-0.5
73,457	-		GFF2653	0.83	-0.5
73,477	-		GFF2653	0.84	+0.5
73,479	+		GFF2653	0.84	+0.9
73,480	-		GFF2653	0.85	-0.4
73,608	+				-0.6
73,609	-				+0.2
73,674	+				-0.1
73,675	-				-0.7
73,675	-				-0.1
73,745	+				-0.7
73,745	+				-0.5
73,746	-				+1.1
73,746	-				-1.0
73,746	-				+0.1
74,583	+		GFF2654	0.47	-0.5
75,054	-		GFF2654	0.74	-1.3
75,054	-		GFF2654	0.74	-0.2
75,054	-		GFF2654	0.74	-0.2
75,094	+		GFF2654	0.77	-1.3
75,094	+		GFF2654	0.77	-1.2
75,221	+		GFF2654	0.84	-0.8
75,378	+				+0.2
75,378	+				-0.8
75,378	+				+0.1
75,379	-				-0.3
75,379	-				-0.5
76,281	+		GFF2655	0.47	-0.7
76,402	+		GFF2655	0.54	+0.7
76,402	+		GFF2655	0.54	-1.6
76,402	+		GFF2655	0.54	+0.9
76,402	+		GFF2655	0.54	+0.5
76,402	+		GFF2655	0.54	-0.5
76,402	+		GFF2655	0.54	+0.5
76,402	+		GFF2655	0.54	+1.0
76,403	-		GFF2655	0.54	-0.3
76,403	-		GFF2655	0.54	-0.4
76,403	-		GFF2655	0.54	-2.4
76,403	-		GFF2655	0.54	-1.7
76,403	-		GFF2655	0.54	-0.7
76,403	-		GFF2655	0.54	-2.1
76,403	-		GFF2655	0.54	-0.1
76,403	-		GFF2655	0.54	-0.7