Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1389 and GFF1390 overlap by 4 nucleotides GFF1390 and GFF1391 are separated by 137 nucleotides GFF1391 and GFF1392 are separated by 16 nucleotides
GFF1389 - Paraquat-inducible protein B, at 735,503 to 737,149
GFF1389
GFF1390 - ortholog of Bordetella pertussis (BX470248) BP2750, at 737,146 to 737,775
GFF1390
GFF1391 - Uncharacterized MFS-type transporter, at 737,913 to 739,493
GFF1391
GFF1392 - Monooxygenase, flavin-binding family, at 739,510 to 740,979
GFF1392
Position (kb) 737
738
739
740 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 737.093 kb on + strand at 737.093 kb on + strand at 737.094 kb on - strand at 737.094 kb on - strand at 737.227 kb on + strand, within GFF1390 at 737.227 kb on + strand, within GFF1390 at 737.227 kb on + strand, within GFF1390 at 737.227 kb on + strand, within GFF1390 at 737.227 kb on + strand, within GFF1390 at 737.227 kb on + strand, within GFF1390 at 737.228 kb on - strand, within GFF1390 at 737.228 kb on - strand, within GFF1390 at 737.228 kb on - strand, within GFF1390 at 737.228 kb on - strand, within GFF1390 at 737.230 kb on + strand, within GFF1390 at 737.230 kb on + strand, within GFF1390 at 737.230 kb on + strand, within GFF1390 at 737.230 kb on + strand, within GFF1390 at 737.231 kb on - strand, within GFF1390 at 737.299 kb on + strand, within GFF1390 at 737.299 kb on + strand, within GFF1390 at 737.848 kb on - strand at 737.848 kb on - strand at 737.848 kb on - strand at 738.138 kb on + strand, within GFF1391 at 738.138 kb on + strand, within GFF1391 at 738.139 kb on - strand, within GFF1391 at 738.139 kb on - strand, within GFF1391 at 738.139 kb on - strand, within GFF1391 at 738.192 kb on + strand, within GFF1391 at 738.206 kb on + strand, within GFF1391 at 738.207 kb on - strand, within GFF1391 at 738.207 kb on - strand, within GFF1391 at 738.618 kb on + strand, within GFF1391 at 738.619 kb on - strand, within GFF1391 at 738.619 kb on - strand, within GFF1391 at 738.804 kb on + strand, within GFF1391 at 738.828 kb on + strand, within GFF1391 at 738.829 kb on - strand, within GFF1391 at 738.829 kb on - strand, within GFF1391 at 738.865 kb on - strand, within GFF1391 at 739.041 kb on + strand, within GFF1391 at 739.042 kb on - strand, within GFF1391 at 739.042 kb on - strand, within GFF1391 at 739.042 kb on - strand, within GFF1391 at 739.042 kb on - strand, within GFF1391 at 739.042 kb on - strand, within GFF1391 at 739.042 kb on - strand, within GFF1391 at 739.042 kb on - strand, within GFF1391 at 739.693 kb on + strand, within GFF1392 at 739.693 kb on + strand, within GFF1392 at 739.693 kb on + strand, within GFF1392 at 739.693 kb on + strand, within GFF1392 at 739.693 kb on + strand, within GFF1392 at 739.693 kb on + strand, within GFF1392 at 739.693 kb on + strand, within GFF1392 at 739.693 kb on + strand, within GFF1392 at 739.694 kb on - strand, within GFF1392 at 739.694 kb on - strand, within GFF1392 at 739.694 kb on - strand, within GFF1392 at 739.694 kb on - strand, within GFF1392 at 739.694 kb on - strand, within GFF1392 at 739.694 kb on - strand, within GFF1392 at 739.694 kb on - strand, within GFF1392 at 739.706 kb on - strand, within GFF1392 at 739.765 kb on + strand, within GFF1392 at 739.765 kb on + strand, within GFF1392 at 739.765 kb on + strand, within GFF1392 at 739.765 kb on + strand, within GFF1392 at 739.765 kb on + strand, within GFF1392 at 739.766 kb on - strand, within GFF1392 at 739.942 kb on + strand, within GFF1392 at 739.942 kb on + strand, within GFF1392 at 739.942 kb on + strand, within GFF1392 at 739.942 kb on + strand, within GFF1392 at 739.942 kb on + strand, within GFF1392 at 739.943 kb on - strand, within GFF1392 at 739.943 kb on - strand, within GFF1392 at 739.943 kb on - strand, within GFF1392 at 739.948 kb on + strand, within GFF1392 at 739.949 kb on - strand, within GFF1392 at 739.949 kb on - strand, within GFF1392 at 739.991 kb on - strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.150 kb on - strand, within GFF1392 at 740.150 kb on - strand, within GFF1392 at 740.150 kb on - strand, within GFF1392 at 740.150 kb on - strand, within GFF1392 at 740.150 kb on - strand, within GFF1392 at 740.150 kb on - strand, within GFF1392 at 740.150 kb on - strand, within GFF1392 at 740.150 kb on - strand, within GFF1392 at 740.150 kb on - strand, within GFF1392 at 740.221 kb on + strand, within GFF1392 at 740.222 kb on - strand, within GFF1392 at 740.344 kb on + strand, within GFF1392 at 740.374 kb on + strand, within GFF1392 at 740.374 kb on + strand, within GFF1392 at 740.375 kb on - strand, within GFF1392
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 737,093 + -0.4 737,093 + -1.4 737,094 - -0.6 737,094 - -0.1 737,227 + GFF1390 0.13 -0.4 737,227 + GFF1390 0.13 -0.2 737,227 + GFF1390 0.13 -0.8 737,227 + GFF1390 0.13 -2.2 737,227 + GFF1390 0.13 +0.2 737,227 + GFF1390 0.13 -1.1 737,228 - GFF1390 0.13 +0.0 737,228 - GFF1390 0.13 +0.2 737,228 - GFF1390 0.13 -0.1 737,228 - GFF1390 0.13 -0.0 737,230 + GFF1390 0.13 +0.6 737,230 + GFF1390 0.13 -0.7 737,230 + GFF1390 0.13 -1.2 737,230 + GFF1390 0.13 +0.4 737,231 - GFF1390 0.13 -3.1 737,299 + GFF1390 0.24 +1.4 737,299 + GFF1390 0.24 -0.9 737,848 - -0.3 737,848 - -0.9 737,848 - +1.1 738,138 + GFF1391 0.14 +1.2 738,138 + GFF1391 0.14 -0.6 738,139 - GFF1391 0.14 -0.1 738,139 - GFF1391 0.14 +0.1 738,139 - GFF1391 0.14 +0.0 738,192 + GFF1391 0.18 +1.4 738,206 + GFF1391 0.19 +1.4 738,207 - GFF1391 0.19 -0.9 738,207 - GFF1391 0.19 +0.2 738,618 + GFF1391 0.45 +1.4 738,619 - GFF1391 0.45 +1.8 738,619 - GFF1391 0.45 +0.2 738,804 + GFF1391 0.56 +0.9 738,828 + GFF1391 0.58 +0.7 738,829 - GFF1391 0.58 +0.4 738,829 - GFF1391 0.58 -0.9 738,865 - GFF1391 0.60 -0.2 739,041 + GFF1391 0.71 +0.5 739,042 - GFF1391 0.71 +1.8 739,042 - GFF1391 0.71 -0.1 739,042 - GFF1391 0.71 +1.1 739,042 - GFF1391 0.71 -0.4 739,042 - GFF1391 0.71 +0.1 739,042 - GFF1391 0.71 +0.1 739,042 - GFF1391 0.71 -0.0 739,693 + GFF1392 0.12 -0.6 739,693 + GFF1392 0.12 -0.9 739,693 + GFF1392 0.12 -1.5 739,693 + GFF1392 0.12 -0.0 739,693 + GFF1392 0.12 -0.3 739,693 + GFF1392 0.12 -0.1 739,693 + GFF1392 0.12 -0.7 739,693 + GFF1392 0.12 -1.3 739,694 - GFF1392 0.13 -0.2 739,694 - GFF1392 0.13 -0.7 739,694 - GFF1392 0.13 -0.1 739,694 - GFF1392 0.13 -0.5 739,694 - GFF1392 0.13 +1.0 739,694 - GFF1392 0.13 -1.7 739,694 - GFF1392 0.13 -0.2 739,706 - GFF1392 0.13 -0.0 739,765 + GFF1392 0.17 -0.4 739,765 + GFF1392 0.17 -0.2 739,765 + GFF1392 0.17 -1.9 739,765 + GFF1392 0.17 -1.0 739,765 + GFF1392 0.17 -0.0 739,766 - GFF1392 0.17 -0.8 739,942 + GFF1392 0.29 -2.8 739,942 + GFF1392 0.29 +0.4 739,942 + GFF1392 0.29 -0.5 739,942 + GFF1392 0.29 -1.1 739,942 + GFF1392 0.29 +0.5 739,943 - GFF1392 0.29 +0.2 739,943 - GFF1392 0.29 +0.4 739,943 - GFF1392 0.29 -0.9 739,948 + GFF1392 0.30 -0.6 739,949 - GFF1392 0.30 -0.4 739,949 - GFF1392 0.30 -0.2 739,991 - GFF1392 0.33 -0.2 740,149 + GFF1392 0.43 +0.5 740,149 + GFF1392 0.43 -0.6 740,149 + GFF1392 0.43 +1.6 740,149 + GFF1392 0.43 -1.0 740,149 + GFF1392 0.43 -0.5 740,149 + GFF1392 0.43 -1.3 740,149 + GFF1392 0.43 +0.1 740,149 + GFF1392 0.43 -0.1 740,149 + GFF1392 0.43 -0.6 740,149 + GFF1392 0.43 -1.2 740,150 - GFF1392 0.44 -0.9 740,150 - GFF1392 0.44 +0.6 740,150 - GFF1392 0.44 -0.4 740,150 - GFF1392 0.44 -3.3 740,150 - GFF1392 0.44 -0.5 740,150 - GFF1392 0.44 +1.3 740,150 - GFF1392 0.44 +1.6 740,150 - GFF1392 0.44 +0.4 740,150 - GFF1392 0.44 +0.1 740,221 + GFF1392 0.48 +0.0 740,222 - GFF1392 0.48 -0.2 740,344 + GFF1392 0.57 -1.2 740,374 + GFF1392 0.59 -1.0 740,374 + GFF1392 0.59 -0.1 740,375 - GFF1392 0.59 +0.4
Or see this region's nucleotide sequence