Strain Fitness in Variovorax sp. SCN45 around GFF6370

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
38,795	+		GFF6369	0.12	+0.7
39,164	-		GFF6369	0.54	-0.7
39,767	+		GFF6370	0.24	+0.7
39,767	+		GFF6370	0.24	+0.1
39,767	+		GFF6370	0.24	+0.6
40,155	-				-0.8
40,261	+				-0.6
40,261	+				-0.2
40,262	-				-1.0
40,396	+		GFF6371	0.14	-0.6
40,396	+		GFF6371	0.14	+1.3
40,396	+		GFF6371	0.14	+0.7
40,483	+		GFF6371	0.20	+1.3
40,513	+		GFF6371	0.22	-0.9
40,513	+		GFF6371	0.22	+0.2
40,561	+		GFF6371	0.25	-1.0
40,561	+		GFF6371	0.25	-0.2
40,562	-		GFF6371	0.25	+0.4
40,976	-		GFF6371	0.52	-0.5