Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF833 and GFF834 are separated by 13 nucleotides GFF834 and GFF835 are separated by 6 nucleotides GFF835 and GFF836 overlap by 4 nucleotides GFF836 and GFF837 are separated by 34 nucleotides
GFF833 - Proteins containing SET domain, at 138,973 to 139,461
GFF833
GFF834 - hypothetical protein, at 139,475 to 140,344
GFF834
GFF835 - Two-component system sensor histidine kinase, at 140,351 to 141,631
GFF835
GFF836 - Vitamin B12 ABC transporter, substrate-binding protein BtuF, at 141,628 to 142,569
GFF836
GFF837 - FIG01002808: hypothetical protein, at 142,604 to 143,455
GFF837
Position (kb) 140
141
142 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 139.725 kb on + strand, within GFF834 at 139.726 kb on - strand, within GFF834 at 139.751 kb on + strand, within GFF834 at 139.751 kb on + strand, within GFF834 at 140.110 kb on - strand, within GFF834 at 140.253 kb on + strand, within GFF834 at 140.253 kb on + strand, within GFF834 at 140.253 kb on + strand, within GFF834 at 140.254 kb on - strand, within GFF834 at 140.263 kb on - strand at 140.417 kb on - strand at 140.451 kb on + strand at 140.451 kb on + strand at 140.451 kb on + strand at 140.451 kb on + strand at 140.451 kb on + strand at 140.451 kb on + strand at 140.451 kb on + strand at 140.451 kb on + strand at 140.451 kb on + strand at 140.451 kb on + strand at 140.452 kb on - strand at 140.452 kb on - strand at 140.452 kb on - strand at 140.452 kb on - strand at 140.452 kb on - strand at 140.452 kb on - strand at 140.452 kb on - strand at 140.452 kb on - strand at 140.452 kb on - strand at 140.452 kb on - strand at 140.452 kb on - strand at 140.452 kb on - strand at 140.503 kb on - strand, within GFF835 at 140.843 kb on + strand, within GFF835 at 140.843 kb on + strand, within GFF835 at 140.844 kb on - strand, within GFF835 at 140.844 kb on - strand, within GFF835 at 140.844 kb on - strand, within GFF835 at 140.844 kb on - strand, within GFF835 at 141.180 kb on + strand, within GFF835 at 141.181 kb on - strand, within GFF835 at 141.181 kb on - strand, within GFF835 at 141.214 kb on + strand, within GFF835 at 141.214 kb on + strand, within GFF835 at 141.214 kb on + strand, within GFF835 at 141.214 kb on + strand, within GFF835 at 141.215 kb on - strand, within GFF835 at 141.215 kb on - strand, within GFF835 at 141.215 kb on - strand, within GFF835 at 141.215 kb on - strand, within GFF835 at 141.215 kb on - strand, within GFF835 at 141.215 kb on - strand, within GFF835 at 141.215 kb on - strand, within GFF835 at 141.215 kb on - strand, within GFF835 at 141.215 kb on - strand, within GFF835 at 141.215 kb on - strand, within GFF835 at 141.216 kb on + strand, within GFF835 at 141.216 kb on + strand, within GFF835 at 141.216 kb on + strand, within GFF835 at 141.216 kb on + strand, within GFF835 at 141.216 kb on + strand, within GFF835 at 141.216 kb on + strand, within GFF835 at 141.216 kb on + strand, within GFF835 at 141.216 kb on + strand, within GFF835 at 141.216 kb on + strand, within GFF835 at 141.216 kb on + strand, within GFF835 at 141.216 kb on + strand, within GFF835 at 141.217 kb on - strand, within GFF835 at 141.217 kb on - strand, within GFF835 at 141.217 kb on - strand, within GFF835 at 141.217 kb on - strand, within GFF835 at 141.217 kb on - strand, within GFF835 at 141.217 kb on - strand, within GFF835 at 141.217 kb on - strand, within GFF835 at 141.217 kb on - strand, within GFF835 at 141.217 kb on - strand, within GFF835 at 141.217 kb on - strand, within GFF835 at 141.217 kb on - strand, within GFF835 at 141.217 kb on - strand, within GFF835 at 141.217 kb on - strand, within GFF835 at 141.217 kb on - strand, within GFF835 at 141.217 kb on - strand, within GFF835 at 141.217 kb on - strand, within GFF835 at 141.217 kb on - strand, within GFF835 at 141.217 kb on - strand, within GFF835 at 141.231 kb on + strand, within GFF835 at 141.231 kb on + strand, within GFF835 at 141.231 kb on + strand, within GFF835 at 141.231 kb on + strand, within GFF835 at 141.231 kb on + strand, within GFF835 at 141.232 kb on - strand, within GFF835 at 141.258 kb on + strand, within GFF835 at 141.258 kb on + strand, within GFF835 at 141.258 kb on + strand, within GFF835 at 141.503 kb on + strand, within GFF835 at 141.503 kb on + strand, within GFF835 at 141.504 kb on - strand at 141.504 kb on - strand at 141.504 kb on - strand at 141.594 kb on + strand at 141.594 kb on + strand at 141.594 kb on + strand at 141.594 kb on + strand at 141.594 kb on + strand at 141.595 kb on - strand at 141.595 kb on - strand at 141.595 kb on - strand at 141.595 kb on - strand at 141.595 kb on - strand at 141.595 kb on - strand at 141.595 kb on - strand at 141.983 kb on + strand, within GFF836 at 141.984 kb on - strand, within GFF836 at 142.605 kb on + strand at 142.605 kb on + strand at 142.605 kb on + strand at 142.606 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 139,725 + GFF834 0.29 -0.7 139,726 - GFF834 0.29 -0.4 139,751 + GFF834 0.32 -0.0 139,751 + GFF834 0.32 +0.5 140,110 - GFF834 0.73 -0.1 140,253 + GFF834 0.89 +0.7 140,253 + GFF834 0.89 +0.3 140,253 + GFF834 0.89 -1.0 140,254 - GFF834 0.90 -0.9 140,263 - +1.0 140,417 - -0.5 140,451 + +1.1 140,451 + -1.0 140,451 + +0.4 140,451 + -0.9 140,451 + -0.8 140,451 + -0.7 140,451 + -0.1 140,451 + +0.4 140,451 + +1.0 140,451 + -0.8 140,452 - +0.4 140,452 - -0.1 140,452 - +0.6 140,452 - +1.4 140,452 - -0.3 140,452 - -1.4 140,452 - -0.9 140,452 - +0.3 140,452 - -0.6 140,452 - -0.1 140,452 - -0.6 140,452 - +1.4 140,503 - GFF835 0.12 -0.7 140,843 + GFF835 0.38 -0.3 140,843 + GFF835 0.38 +2.2 140,844 - GFF835 0.38 +0.0 140,844 - GFF835 0.38 +0.3 140,844 - GFF835 0.38 -0.7 140,844 - GFF835 0.38 +0.3 141,180 + GFF835 0.65 +0.9 141,181 - GFF835 0.65 -0.9 141,181 - GFF835 0.65 +1.4 141,214 + GFF835 0.67 +1.1 141,214 + GFF835 0.67 -2.0 141,214 + GFF835 0.67 +0.0 141,214 + GFF835 0.67 -3.1 141,215 - GFF835 0.67 -0.0 141,215 - GFF835 0.67 +1.2 141,215 - GFF835 0.67 -0.4 141,215 - GFF835 0.67 +0.0 141,215 - GFF835 0.67 -0.3 141,215 - GFF835 0.67 +0.1 141,215 - GFF835 0.67 -0.4 141,215 - GFF835 0.67 -0.1 141,215 - GFF835 0.67 -0.5 141,215 - GFF835 0.67 +0.4 141,216 + GFF835 0.68 -0.1 141,216 + GFF835 0.68 -0.5 141,216 + GFF835 0.68 +0.8 141,216 + GFF835 0.68 +0.1 141,216 + GFF835 0.68 -0.1 141,216 + GFF835 0.68 -0.6 141,216 + GFF835 0.68 -0.3 141,216 + GFF835 0.68 +1.7 141,216 + GFF835 0.68 +0.4 141,216 + GFF835 0.68 -0.4 141,216 + GFF835 0.68 +0.4 141,217 - GFF835 0.68 -0.1 141,217 - GFF835 0.68 +0.3 141,217 - GFF835 0.68 -0.5 141,217 - GFF835 0.68 +1.2 141,217 - GFF835 0.68 +0.1 141,217 - GFF835 0.68 -0.9 141,217 - GFF835 0.68 -0.8 141,217 - GFF835 0.68 -0.6 141,217 - GFF835 0.68 -0.6 141,217 - GFF835 0.68 -0.4 141,217 - GFF835 0.68 -0.5 141,217 - GFF835 0.68 +0.7 141,217 - GFF835 0.68 +0.6 141,217 - GFF835 0.68 +2.0 141,217 - GFF835 0.68 +0.4 141,217 - GFF835 0.68 +0.3 141,217 - GFF835 0.68 +0.1 141,217 - GFF835 0.68 -0.3 141,231 + GFF835 0.69 +0.8 141,231 + GFF835 0.69 -0.1 141,231 + GFF835 0.69 -0.0 141,231 + GFF835 0.69 +0.3 141,231 + GFF835 0.69 -0.3 141,232 - GFF835 0.69 -1.7 141,258 + GFF835 0.71 -0.1 141,258 + GFF835 0.71 -0.2 141,258 + GFF835 0.71 +0.6 141,503 + GFF835 0.90 -0.3 141,503 + GFF835 0.90 +0.2 141,504 - +0.6 141,504 - -0.1 141,504 - +0.2 141,594 + +1.8 141,594 + -0.6 141,594 + -1.3 141,594 + +0.1 141,594 + +0.6 141,595 - -1.5 141,595 - -0.4 141,595 - +0.9 141,595 - -0.6 141,595 - +0.2 141,595 - -1.6 141,595 - +0.3 141,983 + GFF836 0.38 -1.6 141,984 - GFF836 0.38 +0.0 142,605 + -0.4 142,605 + -0.4 142,605 + -0.4 142,606 - +0.4
Or see this region's nucleotide sequence