Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7382 and GFF7383 are separated by 537 nucleotides GFF7383 and GFF7384 are separated by 7 nucleotides
GFF7382 - hypothetical protein AF1210, at 83 to 373
GFF7382
GFF7383 - Esterase/lipase, at 911 to 1,903
GFF7383
GFF7384 - hypothetical protein, at 1,911 to 3,020
GFF7384
Position (kb) 0
1
2 Strain fitness (log2 ratio) -1
0
1 at 0.069 kb on + strand at 0.069 kb on + strand at 0.092 kb on - strand at 0.119 kb on + strand, within GFF7382 at 0.265 kb on - strand, within GFF7382 at 0.295 kb on - strand, within GFF7382 at 0.437 kb on + strand at 0.538 kb on + strand at 0.538 kb on + strand at 0.539 kb on - strand at 0.539 kb on - strand at 0.539 kb on - strand at 0.539 kb on - strand at 0.599 kb on - strand at 0.697 kb on + strand at 0.698 kb on - strand at 0.999 kb on + strand at 0.999 kb on + strand at 1.119 kb on - strand, within GFF7383 at 1.119 kb on - strand, within GFF7383 at 1.164 kb on - strand, within GFF7383 at 1.205 kb on + strand, within GFF7383 at 1.205 kb on + strand, within GFF7383 at 1.348 kb on + strand, within GFF7383 at 1.390 kb on + strand, within GFF7383 at 1.391 kb on - strand, within GFF7383 at 1.405 kb on + strand, within GFF7383 at 1.406 kb on - strand, within GFF7383 at 1.458 kb on + strand, within GFF7383 at 1.459 kb on - strand, within GFF7383 at 1.459 kb on - strand, within GFF7383 at 1.459 kb on - strand, within GFF7383 at 1.511 kb on + strand, within GFF7383 at 1.512 kb on - strand, within GFF7383 at 1.742 kb on + strand, within GFF7383 at 1.742 kb on + strand, within GFF7383 at 1.742 kb on + strand, within GFF7383 at 1.743 kb on - strand, within GFF7383 at 1.765 kb on - strand, within GFF7383 at 2.175 kb on + strand, within GFF7384 at 2.223 kb on + strand, within GFF7384 at 2.223 kb on + strand, within GFF7384 at 2.223 kb on + strand, within GFF7384
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 69 + -1.1 69 + +0.7 92 - -0.7 119 + GFF7382 0.12 -1.1 265 - GFF7382 0.63 -0.2 295 - GFF7382 0.73 -0.9 437 + -0.6 538 + -0.3 538 + -0.3 539 - -0.1 539 - +0.7 539 - -0.9 539 - +0.9 599 - -0.4 697 + -0.0 698 - -1.1 999 + -1.3 999 + +0.4 1,119 - GFF7383 0.21 +1.4 1,119 - GFF7383 0.21 +1.5 1,164 - GFF7383 0.25 +0.0 1,205 + GFF7383 0.30 -1.7 1,205 + GFF7383 0.30 +0.9 1,348 + GFF7383 0.44 -0.0 1,390 + GFF7383 0.48 +0.4 1,391 - GFF7383 0.48 -0.7 1,405 + GFF7383 0.50 -1.0 1,406 - GFF7383 0.50 +1.3 1,458 + GFF7383 0.55 +1.4 1,459 - GFF7383 0.55 +0.5 1,459 - GFF7383 0.55 +0.5 1,459 - GFF7383 0.55 -0.4 1,511 + GFF7383 0.60 +0.8 1,512 - GFF7383 0.61 -0.2 1,742 + GFF7383 0.84 +0.3 1,742 + GFF7383 0.84 +0.0 1,742 + GFF7383 0.84 +1.5 1,743 - GFF7383 0.84 -0.0 1,765 - GFF7383 0.86 -0.1 2,175 + GFF7384 0.24 -0.9 2,223 + GFF7384 0.28 -0.2 2,223 + GFF7384 0.28 -0.4 2,223 + GFF7384 0.28 -0.1
Or see this region's nucleotide sequence