Strain Fitness in Variovorax sp. SCN45 around GFF7273

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
21,703	+		GFF7272	0.59	-0.2
21,704	-		GFF7272	0.59	-0.7
21,818	-		GFF7272	0.67	-0.2
21,818	-		GFF7272	0.67	+0.5
22,087	+		GFF7272	0.87	+0.6
22,087	+		GFF7272	0.87	-0.3
22,088	-		GFF7272	0.87	-0.7
22,250	+				-0.5
22,250	+				+0.7
22,251	-				-1.4
22,449	-				-1.2
22,659	-				+0.8
22,939	+		GFF7273	0.37	-0.5
22,940	-		GFF7273	0.37	+1.8
23,080	+		GFF7273	0.53	-0.3
23,081	-		GFF7273	0.53	-0.2
23,081	-		GFF7273	0.53	+0.1
23,081	-		GFF7273	0.53	-0.1
23,266	+		GFF7273	0.75	-0.0
23,285	-		GFF7273	0.77	+0.4
23,296	+		GFF7273	0.78	-0.1
23,457	+				+0.6
23,873	-		GFF7274	0.36	+0.4
24,223	-		GFF7274	0.68	-0.7
24,410	-		GFF7274	0.85	+0.1
24,436	+		GFF7274	0.87	+1.2
24,437	-		GFF7274	0.87	-0.2
24,438	+		GFF7274	0.87	-0.2
24,438	+		GFF7274	0.87	-0.8
24,439	-		GFF7274	0.88	-0.8