Strain Fitness in Variovorax sp. SCN45 around GFF7214

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
31,846	-		GFF7213	0.69	+0.3
31,846	-		GFF7213	0.69	-0.4
32,048	-		GFF7213	0.77	-0.8
32,048	-		GFF7213	0.77	-0.3
32,290	+		GFF7213	0.87	+0.7
32,866	+		GFF7214	0.15	-0.7
32,866	+		GFF7214	0.15	+0.8
32,908	-		GFF7214	0.18	+1.1
32,951	+		GFF7214	0.21	+0.8
33,098	-		GFF7214	0.33	+0.1
33,635	-		GFF7214	0.74	+0.2
33,695	+		GFF7214	0.78	-1.5
33,696	-		GFF7214	0.78	+0.3
33,847	+		GFF7214	0.90	-1.3
33,848	-		GFF7214	0.90	+0.2
33,868	+				+0.1
33,869	-				+1.9
34,068	+				-0.0
34,161	+				-0.7
34,162	-				+1.1
34,162	-				-1.0
34,701	+		GFF7215	0.62	-0.4
34,781	+		GFF7215	0.71	+0.3
34,781	+		GFF7215	0.71	+0.5
34,781	+		GFF7215	0.71	-1.5
34,782	-		GFF7215	0.71	-1.1
34,782	-		GFF7215	0.71	-0.9
34,782	-		GFF7215	0.71	-0.2
34,932	+		GFF7215	0.88	-0.1
34,933	-		GFF7215	0.88	-0.3
34,933	-		GFF7215	0.88	+0.1
34,933	-		GFF7215	0.88	-1.6
34,933	-		GFF7215	0.88	+0.3