Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF705 and GFF706 are separated by 370 nucleotides GFF706 and GFF707 overlap by 4 nucleotides
GFF705 - Transcriptional regulator, AcrR family, at 761,778 to 762,359
GFF705
GFF706 - hypothetical protein, at 762,730 to 764,142
GFF706
GFF707 - probable integral membrane protein NMA1898, at 764,139 to 765,566
GFF707
Position (kb) 762
763
764
765 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 761.737 kb on - strand at 761.744 kb on - strand at 761.749 kb on - strand at 761.784 kb on - strand at 761.784 kb on - strand at 761.784 kb on - strand at 761.824 kb on + strand at 761.824 kb on + strand at 761.824 kb on + strand at 761.824 kb on + strand at 761.824 kb on + strand at 761.824 kb on + strand at 761.825 kb on - strand at 761.825 kb on - strand at 761.825 kb on - strand at 761.825 kb on - strand at 761.825 kb on - strand at 761.825 kb on - strand at 761.859 kb on + strand, within GFF705 at 761.919 kb on + strand, within GFF705 at 761.919 kb on + strand, within GFF705 at 761.919 kb on + strand, within GFF705 at 761.919 kb on + strand, within GFF705 at 761.920 kb on - strand, within GFF705 at 761.920 kb on - strand, within GFF705 at 761.920 kb on - strand, within GFF705 at 762.057 kb on + strand, within GFF705 at 762.058 kb on - strand, within GFF705 at 762.058 kb on - strand, within GFF705 at 762.390 kb on + strand at 762.391 kb on - strand at 762.391 kb on - strand at 762.436 kb on + strand at 762.437 kb on - strand at 762.437 kb on - strand at 762.437 kb on - strand at 762.437 kb on - strand at 762.437 kb on - strand at 762.437 kb on - strand at 762.437 kb on - strand at 762.525 kb on - strand at 762.533 kb on + strand at 762.533 kb on + strand at 762.533 kb on + strand at 762.533 kb on + strand at 762.533 kb on + strand at 762.533 kb on + strand at 762.534 kb on - strand at 762.534 kb on - strand at 762.534 kb on - strand at 762.534 kb on - strand at 762.534 kb on - strand at 762.534 kb on - strand at 762.534 kb on - strand at 762.679 kb on + strand at 762.679 kb on + strand at 762.680 kb on - strand at 762.680 kb on - strand at 762.680 kb on - strand at 762.788 kb on + strand at 762.789 kb on - strand at 763.360 kb on + strand, within GFF706 at 763.361 kb on - strand, within GFF706 at 763.546 kb on + strand, within GFF706 at 763.547 kb on - strand, within GFF706 at 763.639 kb on + strand, within GFF706 at 763.639 kb on + strand, within GFF706 at 763.640 kb on - strand, within GFF706 at 763.640 kb on - strand, within GFF706 at 763.640 kb on - strand, within GFF706 at 763.643 kb on - strand, within GFF706 at 763.643 kb on - strand, within GFF706 at 764.659 kb on - strand, within GFF707 at 764.724 kb on + strand, within GFF707 at 764.724 kb on + strand, within GFF707 at 764.724 kb on + strand, within GFF707 at 764.724 kb on + strand, within GFF707 at 764.724 kb on + strand, within GFF707 at 764.724 kb on + strand, within GFF707 at 764.724 kb on + strand, within GFF707 at 764.724 kb on + strand, within GFF707 at 764.724 kb on + strand, within GFF707 at 764.725 kb on - strand, within GFF707 at 764.725 kb on - strand, within GFF707 at 764.725 kb on - strand, within GFF707 at 764.986 kb on - strand, within GFF707 at 764.986 kb on - strand, within GFF707
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 761,737 - -0.4 761,744 - +0.7 761,749 - -0.3 761,784 - -0.1 761,784 - -0.1 761,784 - -0.2 761,824 + +1.5 761,824 + -0.2 761,824 + -0.0 761,824 + -0.8 761,824 + -0.4 761,824 + -1.2 761,825 - -0.1 761,825 - +0.3 761,825 - -0.3 761,825 - +0.8 761,825 - -0.7 761,825 - +0.0 761,859 + GFF705 0.14 -1.3 761,919 + GFF705 0.24 +0.4 761,919 + GFF705 0.24 -0.6 761,919 + GFF705 0.24 -1.3 761,919 + GFF705 0.24 +1.3 761,920 - GFF705 0.24 -0.4 761,920 - GFF705 0.24 +0.5 761,920 - GFF705 0.24 -0.7 762,057 + GFF705 0.48 -0.3 762,058 - GFF705 0.48 -0.7 762,058 - GFF705 0.48 +0.3 762,390 + -1.5 762,391 - +1.3 762,391 - -0.4 762,436 + -0.9 762,437 - -0.2 762,437 - -0.1 762,437 - -0.3 762,437 - -0.1 762,437 - -1.2 762,437 - -1.2 762,437 - -0.1 762,525 - -0.3 762,533 + -0.9 762,533 + -0.1 762,533 + -0.8 762,533 + -0.3 762,533 + -0.3 762,533 + -1.6 762,534 - -1.4 762,534 - -3.4 762,534 - +0.4 762,534 - -0.4 762,534 - +0.5 762,534 - -0.9 762,534 - +0.9 762,679 + -0.1 762,679 + -0.0 762,680 - -0.3 762,680 - -0.8 762,680 - -1.6 762,788 + -0.7 762,789 - -1.1 763,360 + GFF706 0.45 -1.1 763,361 - GFF706 0.45 +0.5 763,546 + GFF706 0.58 +0.3 763,547 - GFF706 0.58 +0.1 763,639 + GFF706 0.64 -0.3 763,639 + GFF706 0.64 -2.2 763,640 - GFF706 0.64 -0.7 763,640 - GFF706 0.64 -0.4 763,640 - GFF706 0.64 -0.6 763,643 - GFF706 0.65 -0.7 763,643 - GFF706 0.65 +0.3 764,659 - GFF707 0.36 -0.9 764,724 + GFF707 0.41 -0.2 764,724 + GFF707 0.41 +0.6 764,724 + GFF707 0.41 -0.8 764,724 + GFF707 0.41 +1.3 764,724 + GFF707 0.41 -1.1 764,724 + GFF707 0.41 -0.2 764,724 + GFF707 0.41 -0.6 764,724 + GFF707 0.41 +0.3 764,724 + GFF707 0.41 -0.2 764,725 - GFF707 0.41 -1.0 764,725 - GFF707 0.41 -0.5 764,725 - GFF707 0.41 -0.4 764,986 - GFF707 0.59 -1.2 764,986 - GFF707 0.59 -1.1
Or see this region's nucleotide sequence