Strain Fitness in Variovorax sp. SCN45 around GFF6980

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
51,522	-				-0.1
51,617	-				+0.6
51,617	-				+0.7
51,688	+				-1.0
51,691	+				+1.1
52,088	-				+0.5
52,167	+				-0.3
52,168	-				-0.2
52,180	-				+0.2
52,205	+				-0.3
52,206	-				+1.0
52,999	+		GFF6980	0.74	+0.0
52,999	+		GFF6980	0.74	-1.2
53,000	-		GFF6980	0.74	-1.3
53,000	-		GFF6980	0.74	-0.4
53,000	-		GFF6980	0.74	+0.7
53,318	+				-1.1
53,389	-				+0.3