Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF681 and GFF682 overlap by 4 nucleotides GFF682 and GFF683 overlap by 12 nucleotides GFF683 and GFF684 are separated by 45 nucleotides
GFF681 - Hypothetical protein in cluster with At3g50560-like gene family, at 735,698 to 736,537
GFF681
GFF682 - 2-hydroxychromene-2-carboxylate isomerase family protein, at 736,534 to 737,139
GFF682
GFF683 - Transcriptional regulator, LysR family, at 737,128 to 738,048
GFF683
GFF684 - FIG00553873: hypothetical protein, at 738,094 to 739,074
GFF684
Position (kb) 737
738
739 Strain fitness (log2 ratio) -2
-1
0
1
2 at 736.193 kb on + strand, within GFF681 at 736.193 kb on + strand, within GFF681 at 736.193 kb on + strand, within GFF681 at 736.194 kb on - strand, within GFF681 at 736.194 kb on - strand, within GFF681 at 736.331 kb on + strand, within GFF681 at 736.331 kb on + strand, within GFF681 at 736.331 kb on + strand, within GFF681 at 736.332 kb on - strand, within GFF681 at 736.332 kb on - strand, within GFF681 at 736.332 kb on - strand, within GFF681 at 736.367 kb on + strand, within GFF681 at 736.367 kb on + strand, within GFF681 at 736.367 kb on + strand, within GFF681 at 736.367 kb on + strand, within GFF681 at 736.412 kb on + strand, within GFF681 at 736.413 kb on - strand, within GFF681 at 736.413 kb on - strand, within GFF681 at 736.443 kb on - strand, within GFF681 at 736.573 kb on + strand at 736.573 kb on + strand at 736.573 kb on + strand at 736.573 kb on + strand at 736.573 kb on + strand at 736.573 kb on + strand at 736.573 kb on + strand at 736.573 kb on + strand at 736.573 kb on + strand at 736.573 kb on + strand at 736.573 kb on + strand at 736.573 kb on + strand at 736.573 kb on + strand at 736.573 kb on + strand at 736.573 kb on + strand at 736.574 kb on - strand at 736.574 kb on - strand at 736.574 kb on - strand at 736.574 kb on - strand at 736.574 kb on - strand at 736.574 kb on - strand at 736.574 kb on - strand at 736.574 kb on - strand at 736.574 kb on - strand at 736.574 kb on - strand at 736.574 kb on - strand at 736.574 kb on - strand at 736.574 kb on - strand at 736.579 kb on + strand at 736.579 kb on + strand at 736.579 kb on + strand at 736.579 kb on + strand at 736.579 kb on + strand at 736.580 kb on - strand at 736.580 kb on - strand at 736.580 kb on - strand at 736.580 kb on - strand at 736.580 kb on - strand at 736.580 kb on - strand at 736.720 kb on + strand, within GFF682 at 736.720 kb on + strand, within GFF682 at 736.720 kb on + strand, within GFF682 at 736.720 kb on + strand, within GFF682 at 736.721 kb on - strand, within GFF682 at 736.721 kb on - strand, within GFF682 at 736.721 kb on - strand, within GFF682 at 736.721 kb on - strand, within GFF682 at 736.721 kb on - strand, within GFF682 at 736.721 kb on - strand, within GFF682 at 736.756 kb on + strand, within GFF682 at 736.757 kb on - strand, within GFF682 at 736.757 kb on - strand, within GFF682 at 737.222 kb on + strand, within GFF683 at 737.222 kb on + strand, within GFF683 at 737.223 kb on - strand, within GFF683 at 737.223 kb on - strand, within GFF683 at 737.223 kb on - strand, within GFF683 at 737.223 kb on - strand, within GFF683 at 737.223 kb on - strand, within GFF683 at 737.360 kb on + strand, within GFF683 at 737.361 kb on - strand, within GFF683 at 737.594 kb on + strand, within GFF683 at 737.595 kb on - strand, within GFF683 at 737.595 kb on - strand, within GFF683 at 738.349 kb on + strand, within GFF684 at 738.349 kb on + strand, within GFF684 at 738.349 kb on + strand, within GFF684 at 738.349 kb on + strand, within GFF684 at 738.349 kb on + strand, within GFF684 at 738.349 kb on + strand, within GFF684 at 738.350 kb on - strand, within GFF684 at 738.421 kb on + strand, within GFF684 at 738.422 kb on - strand, within GFF684 at 738.422 kb on - strand, within GFF684 at 738.422 kb on - strand, within GFF684 at 738.422 kb on - strand, within GFF684 at 738.658 kb on + strand, within GFF684 at 738.658 kb on + strand, within GFF684 at 738.659 kb on - strand, within GFF684 at 738.659 kb on - strand, within GFF684 at 738.659 kb on - strand, within GFF684 at 738.659 kb on - strand, within GFF684 at 738.659 kb on - strand, within GFF684 at 738.676 kb on + strand, within GFF684 at 738.676 kb on + strand, within GFF684 at 738.676 kb on + strand, within GFF684 at 738.676 kb on + strand, within GFF684 at 738.676 kb on + strand, within GFF684 at 738.677 kb on - strand, within GFF684 at 738.691 kb on + strand, within GFF684 at 738.691 kb on + strand, within GFF684 at 738.691 kb on + strand, within GFF684 at 738.748 kb on + strand, within GFF684 at 738.748 kb on + strand, within GFF684 at 738.748 kb on + strand, within GFF684 at 738.748 kb on + strand, within GFF684 at 738.748 kb on + strand, within GFF684 at 738.749 kb on - strand, within GFF684 at 738.749 kb on - strand, within GFF684
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 736,193 + GFF681 0.59 -0.8 736,193 + GFF681 0.59 -0.1 736,193 + GFF681 0.59 +0.3 736,194 - GFF681 0.59 -0.0 736,194 - GFF681 0.59 -0.4 736,331 + GFF681 0.75 -0.4 736,331 + GFF681 0.75 -0.1 736,331 + GFF681 0.75 +0.3 736,332 - GFF681 0.75 +0.4 736,332 - GFF681 0.75 -0.1 736,332 - GFF681 0.75 +0.8 736,367 + GFF681 0.80 +0.0 736,367 + GFF681 0.80 +0.2 736,367 + GFF681 0.80 +0.3 736,367 + GFF681 0.80 -0.3 736,412 + GFF681 0.85 +0.8 736,413 - GFF681 0.85 -0.1 736,413 - GFF681 0.85 +0.8 736,443 - GFF681 0.89 -0.1 736,573 + +1.5 736,573 + -0.7 736,573 + -0.1 736,573 + -1.9 736,573 + +0.0 736,573 + -0.1 736,573 + -0.2 736,573 + -0.0 736,573 + -1.1 736,573 + -0.4 736,573 + -0.6 736,573 + -0.0 736,573 + +0.7 736,573 + -0.4 736,573 + +0.5 736,574 - -0.6 736,574 - +0.8 736,574 - -0.6 736,574 - +1.3 736,574 - +0.1 736,574 - +0.3 736,574 - +0.6 736,574 - -0.5 736,574 - +1.5 736,574 - +1.1 736,574 - +0.3 736,574 - -0.5 736,574 - -0.6 736,579 + -0.5 736,579 + +0.4 736,579 + +1.1 736,579 + -0.6 736,579 + -0.3 736,580 - -1.0 736,580 - -0.2 736,580 - -1.3 736,580 - -0.3 736,580 - +0.3 736,580 - +0.3 736,720 + GFF682 0.31 -0.7 736,720 + GFF682 0.31 +2.3 736,720 + GFF682 0.31 +0.0 736,720 + GFF682 0.31 -0.1 736,721 - GFF682 0.31 -1.2 736,721 - GFF682 0.31 -0.6 736,721 - GFF682 0.31 -0.1 736,721 - GFF682 0.31 -0.0 736,721 - GFF682 0.31 +1.4 736,721 - GFF682 0.31 -0.0 736,756 + GFF682 0.37 +0.5 736,757 - GFF682 0.37 -1.2 736,757 - GFF682 0.37 -0.5 737,222 + GFF683 0.10 -0.2 737,222 + GFF683 0.10 -0.7 737,223 - GFF683 0.10 -1.1 737,223 - GFF683 0.10 -0.8 737,223 - GFF683 0.10 -2.7 737,223 - GFF683 0.10 -1.7 737,223 - GFF683 0.10 -0.7 737,360 + GFF683 0.25 -0.3 737,361 - GFF683 0.25 -0.3 737,594 + GFF683 0.51 -0.0 737,595 - GFF683 0.51 +0.3 737,595 - GFF683 0.51 -0.7 738,349 + GFF684 0.26 +0.8 738,349 + GFF684 0.26 -1.3 738,349 + GFF684 0.26 -1.0 738,349 + GFF684 0.26 -0.1 738,349 + GFF684 0.26 +0.4 738,349 + GFF684 0.26 -0.1 738,350 - GFF684 0.26 -0.1 738,421 + GFF684 0.33 +0.2 738,422 - GFF684 0.33 -0.2 738,422 - GFF684 0.33 -0.3 738,422 - GFF684 0.33 +1.3 738,422 - GFF684 0.33 -0.3 738,658 + GFF684 0.57 -0.6 738,658 + GFF684 0.57 -0.8 738,659 - GFF684 0.58 +1.5 738,659 - GFF684 0.58 +0.3 738,659 - GFF684 0.58 -1.7 738,659 - GFF684 0.58 -0.4 738,659 - GFF684 0.58 +1.0 738,676 + GFF684 0.59 -0.0 738,676 + GFF684 0.59 -0.7 738,676 + GFF684 0.59 -0.8 738,676 + GFF684 0.59 -1.0 738,676 + GFF684 0.59 -0.3 738,677 - GFF684 0.59 +0.1 738,691 + GFF684 0.61 -0.5 738,691 + GFF684 0.61 -0.3 738,691 + GFF684 0.61 -1.3 738,748 + GFF684 0.67 +1.7 738,748 + GFF684 0.67 -0.5 738,748 + GFF684 0.67 -0.3 738,748 + GFF684 0.67 +0.5 738,748 + GFF684 0.67 +0.4 738,749 - GFF684 0.67 -0.2 738,749 - GFF684 0.67 -0.4
Or see this region's nucleotide sequence