Strain Fitness in Variovorax sp. SCN45 around GFF5743

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
115,355	+		GFF5742	0.14	+0.3
115,356	-		GFF5742	0.14	-0.9
115,356	-		GFF5742	0.14	-0.4
115,397	+		GFF5742	0.23	-1.1
115,819	-				-0.7
116,215	-		GFF5743	0.46	-0.9
116,215	-		GFF5743	0.46	-0.0
116,340	+		GFF5743	0.58	-1.7
116,341	-		GFF5743	0.58	-1.8
116,752	-				+0.3
117,284	-				+0.5
117,315	+				-0.3
117,315	+				+0.1