Strain Fitness in Variovorax sp. SCN45 around GFF5724

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
92,604	-		GFF5723	0.26	-0.4
92,858	+		GFF5723	0.51	+1.1
92,858	+		GFF5723	0.51	-0.7
92,859	-		GFF5723	0.51	-0.4
92,859	-		GFF5723	0.51	+0.7
92,864	+		GFF5723	0.51	-1.0
93,131	+		GFF5723	0.78	-0.9
93,132	-		GFF5723	0.78	+0.6
93,132	-		GFF5723	0.78	-0.5
93,177	-		GFF5723	0.82	-0.6
93,185	+		GFF5723	0.83	+0.3
93,186	-		GFF5723	0.83	-0.1
93,300	-				-0.7
93,317	+				-0.1
93,980	-				+0.7
94,031	+				-0.7
94,258	-		GFF5725	0.15	-1.8
94,581	+		GFF5725	0.36	-0.3