Strain Fitness in Variovorax sp. SCN45 around GFF4965

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
65,546	+		GFF4964	0.67	+1.0
65,546	+		GFF4964	0.67	+0.2
65,546	+		GFF4964	0.67	+1.6
65,547	-		GFF4964	0.67	+0.9
65,757	-		GFF4964	0.81	-1.1
65,757	-		GFF4964	0.81	-1.8
66,043	+				-1.6
66,043	+				-0.2
66,044	-				-0.8
66,259	+				+0.4
66,260	-				+0.0
66,260	-				+0.1
66,260	-				+1.3
66,260	-				-0.2
66,335	+				+0.6
66,335	+				+0.5
66,494	+		GFF4965	0.30	+0.6
66,494	+		GFF4965	0.30	+0.2
66,671	+		GFF4965	0.54	-0.0
66,671	+		GFF4965	0.54	+0.8
67,031	+				+0.2
67,031	+				+1.3
67,174	+		GFF4966	0.38	+0.9
67,174	+		GFF4966	0.38	-0.3
67,175	-		GFF4966	0.38	-0.5
67,175	-		GFF4966	0.38	-0.2
67,175	-		GFF4966	0.38	-0.1
67,337	+				-0.8
67,338	-				-0.4
67,428	+				+2.2
67,428	+				+0.0
67,428	+				-0.5
67,429	-				+0.8
67,429	-				-0.2
67,429	-				-0.2
67,429	-				-0.3
67,450	+				-0.5
67,451	-				-0.4
67,451	-				+0.0
67,451	-				-0.7
67,512	+				-0.2
67,512	+				+0.5
67,512	+				-0.8
67,512	+				+1.5
67,512	+				+1.2
67,648	+				-0.2
67,649	-				-0.7
67,649	-				-0.7
67,818	-				+0.0