Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4769 and GFF4770 are separated by 37 nucleotides GFF4770 and GFF4771 are separated by 50 nucleotides
GFF4769 - Outer membrane factor (OMF) lipoprotein associated wth EmrAB-OMF efflux system, at 135,717 to 137,189
GFF4769
GFF4770 - Multidrug efflux system EmrAB-OMF, membrane fusion component EmrA, at 137,227 to 138,549
GFF4770
GFF4771 - Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type), at 138,600 to 140,162
GFF4771
Position (kb) 137
138
139 Strain fitness (log2 ratio) -2
-1
0
1
2 at 136.284 kb on + strand, within GFF4769 at 136.284 kb on + strand, within GFF4769 at 136.284 kb on + strand, within GFF4769 at 136.284 kb on + strand, within GFF4769 at 136.285 kb on - strand, within GFF4769 at 136.285 kb on - strand, within GFF4769 at 136.285 kb on - strand, within GFF4769 at 136.680 kb on + strand, within GFF4769 at 136.680 kb on + strand, within GFF4769 at 136.680 kb on + strand, within GFF4769 at 136.863 kb on + strand, within GFF4769 at 136.980 kb on + strand, within GFF4769 at 136.980 kb on + strand, within GFF4769 at 137.022 kb on + strand, within GFF4769 at 137.022 kb on + strand, within GFF4769 at 137.022 kb on + strand, within GFF4769 at 137.022 kb on + strand, within GFF4769 at 137.022 kb on + strand, within GFF4769 at 137.023 kb on - strand, within GFF4769 at 137.023 kb on - strand, within GFF4769 at 137.023 kb on - strand, within GFF4769 at 137.023 kb on - strand, within GFF4769 at 137.023 kb on - strand, within GFF4769 at 137.023 kb on - strand, within GFF4769 at 137.235 kb on + strand at 137.235 kb on + strand at 137.368 kb on + strand, within GFF4770 at 137.368 kb on + strand, within GFF4770 at 137.368 kb on + strand, within GFF4770 at 137.392 kb on + strand, within GFF4770 at 137.392 kb on + strand, within GFF4770 at 137.392 kb on + strand, within GFF4770 at 137.393 kb on - strand, within GFF4770 at 137.393 kb on - strand, within GFF4770 at 137.413 kb on + strand, within GFF4770 at 137.413 kb on + strand, within GFF4770 at 137.413 kb on + strand, within GFF4770 at 137.413 kb on + strand, within GFF4770 at 137.414 kb on - strand, within GFF4770 at 137.602 kb on + strand, within GFF4770 at 137.603 kb on - strand, within GFF4770 at 137.603 kb on - strand, within GFF4770 at 137.603 kb on - strand, within GFF4770 at 137.917 kb on + strand, within GFF4770 at 137.917 kb on + strand, within GFF4770 at 137.917 kb on + strand, within GFF4770 at 137.918 kb on - strand, within GFF4770 at 137.918 kb on - strand, within GFF4770 at 137.962 kb on + strand, within GFF4770 at 137.962 kb on + strand, within GFF4770 at 137.963 kb on - strand, within GFF4770 at 137.963 kb on - strand, within GFF4770 at 138.124 kb on + strand, within GFF4770 at 138.124 kb on + strand, within GFF4770 at 138.125 kb on - strand, within GFF4770 at 138.125 kb on - strand, within GFF4770 at 138.142 kb on + strand, within GFF4770 at 138.143 kb on - strand, within GFF4770 at 138.143 kb on - strand, within GFF4770 at 138.143 kb on - strand, within GFF4770 at 138.397 kb on + strand, within GFF4770 at 138.398 kb on - strand, within GFF4770 at 138.398 kb on - strand, within GFF4770 at 138.398 kb on - strand, within GFF4770 at 138.573 kb on + strand at 138.573 kb on + strand at 138.574 kb on - strand at 138.621 kb on + strand at 138.621 kb on + strand at 138.621 kb on + strand at 138.621 kb on + strand at 138.621 kb on + strand at 138.621 kb on + strand at 138.621 kb on + strand at 138.621 kb on + strand at 138.621 kb on + strand at 138.621 kb on + strand at 138.621 kb on + strand at 138.622 kb on - strand at 138.622 kb on - strand at 138.622 kb on - strand at 138.622 kb on - strand at 138.622 kb on - strand at 138.622 kb on - strand at 138.622 kb on - strand at 138.622 kb on - strand at 138.786 kb on - strand, within GFF4771 at 138.786 kb on - strand, within GFF4771 at 138.786 kb on - strand, within GFF4771 at 138.786 kb on - strand, within GFF4771 at 139.011 kb on + strand, within GFF4771 at 139.011 kb on + strand, within GFF4771 at 139.134 kb on + strand, within GFF4771 at 139.135 kb on - strand, within GFF4771 at 139.135 kb on - strand, within GFF4771 at 139.135 kb on - strand, within GFF4771 at 139.135 kb on - strand, within GFF4771 at 139.135 kb on - strand, within GFF4771 at 139.185 kb on + strand, within GFF4771 at 139.186 kb on - strand, within GFF4771 at 139.186 kb on - strand, within GFF4771 at 139.186 kb on - strand, within GFF4771 at 139.186 kb on - strand, within GFF4771 at 139.462 kb on - strand, within GFF4771 at 139.462 kb on - strand, within GFF4771 at 139.462 kb on - strand, within GFF4771 at 139.521 kb on + strand, within GFF4771 at 139.521 kb on + strand, within GFF4771 at 139.522 kb on - strand, within GFF4771
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 136,284 + GFF4769 0.38 +0.3 136,284 + GFF4769 0.38 +0.6 136,284 + GFF4769 0.38 +1.4 136,284 + GFF4769 0.38 +0.4 136,285 - GFF4769 0.39 +0.7 136,285 - GFF4769 0.39 -2.3 136,285 - GFF4769 0.39 -0.5 136,680 + GFF4769 0.65 +1.0 136,680 + GFF4769 0.65 -0.2 136,680 + GFF4769 0.65 +0.2 136,863 + GFF4769 0.78 +1.1 136,980 + GFF4769 0.86 -0.6 136,980 + GFF4769 0.86 +0.6 137,022 + GFF4769 0.89 +0.2 137,022 + GFF4769 0.89 +0.5 137,022 + GFF4769 0.89 -0.1 137,022 + GFF4769 0.89 +0.4 137,022 + GFF4769 0.89 +0.8 137,023 - GFF4769 0.89 +0.0 137,023 - GFF4769 0.89 +1.4 137,023 - GFF4769 0.89 +0.4 137,023 - GFF4769 0.89 -2.2 137,023 - GFF4769 0.89 -0.5 137,023 - GFF4769 0.89 +0.6 137,235 + +0.1 137,235 + -1.4 137,368 + GFF4770 0.11 -1.4 137,368 + GFF4770 0.11 -0.2 137,368 + GFF4770 0.11 -0.2 137,392 + GFF4770 0.12 +0.9 137,392 + GFF4770 0.12 +0.2 137,392 + GFF4770 0.12 -1.4 137,393 - GFF4770 0.13 +0.9 137,393 - GFF4770 0.13 +0.8 137,413 + GFF4770 0.14 -0.1 137,413 + GFF4770 0.14 -0.4 137,413 + GFF4770 0.14 +0.8 137,413 + GFF4770 0.14 -1.8 137,414 - GFF4770 0.14 -1.4 137,602 + GFF4770 0.28 +0.9 137,603 - GFF4770 0.28 +0.1 137,603 - GFF4770 0.28 +0.0 137,603 - GFF4770 0.28 -0.7 137,917 + GFF4770 0.52 +0.5 137,917 + GFF4770 0.52 -0.0 137,917 + GFF4770 0.52 -0.0 137,918 - GFF4770 0.52 +0.1 137,918 - GFF4770 0.52 -1.4 137,962 + GFF4770 0.56 -0.1 137,962 + GFF4770 0.56 -0.6 137,963 - GFF4770 0.56 +0.8 137,963 - GFF4770 0.56 +0.3 138,124 + GFF4770 0.68 -0.1 138,124 + GFF4770 0.68 +0.6 138,125 - GFF4770 0.68 +0.1 138,125 - GFF4770 0.68 -0.6 138,142 + GFF4770 0.69 -0.8 138,143 - GFF4770 0.69 -0.2 138,143 - GFF4770 0.69 +0.0 138,143 - GFF4770 0.69 +1.4 138,397 + GFF4770 0.88 -1.8 138,398 - GFF4770 0.89 -0.5 138,398 - GFF4770 0.89 -1.0 138,398 - GFF4770 0.89 -0.8 138,573 + -0.0 138,573 + +0.1 138,574 - -0.9 138,621 + -1.0 138,621 + -2.0 138,621 + -0.5 138,621 + -0.2 138,621 + -0.2 138,621 + +0.4 138,621 + -0.5 138,621 + +0.1 138,621 + +0.2 138,621 + +0.1 138,621 + -0.2 138,622 - -0.2 138,622 - -0.2 138,622 - +0.8 138,622 - +0.0 138,622 - +0.5 138,622 - -0.6 138,622 - -0.1 138,622 - -1.1 138,786 - GFF4771 0.12 +1.4 138,786 - GFF4771 0.12 -0.2 138,786 - GFF4771 0.12 +0.9 138,786 - GFF4771 0.12 -0.8 139,011 + GFF4771 0.26 +1.4 139,011 + GFF4771 0.26 +0.4 139,134 + GFF4771 0.34 -0.0 139,135 - GFF4771 0.34 -0.4 139,135 - GFF4771 0.34 +0.7 139,135 - GFF4771 0.34 -0.5 139,135 - GFF4771 0.34 -0.2 139,135 - GFF4771 0.34 +1.9 139,185 + GFF4771 0.37 -0.4 139,186 - GFF4771 0.37 -1.8 139,186 - GFF4771 0.37 -0.1 139,186 - GFF4771 0.37 +0.2 139,186 - GFF4771 0.37 +0.1 139,462 - GFF4771 0.55 -1.0 139,462 - GFF4771 0.55 -1.2 139,462 - GFF4771 0.55 -0.2 139,521 + GFF4771 0.59 -1.6 139,521 + GFF4771 0.59 -1.1 139,522 - GFF4771 0.59 +0.7
Or see this region's nucleotide sequence