Strain Fitness in Variovorax sp. SCN45 around GFF4109

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
11,645	+		GFF4108	0.64	-1.3
11,646	-		GFF4108	0.64	-0.7
11,853	-				-0.8
12,004	+				-0.3
12,005	-				+0.4
12,143	-		GFF4109	0.19	-0.2
12,230	-		GFF4109	0.26	-0.3
12,230	-		GFF4109	0.26	-0.6
12,404	-		GFF4109	0.40	-1.4
12,404	-		GFF4109	0.40	-1.3
12,584	-		GFF4109	0.54	+0.1
12,884	-		GFF4109	0.79	+0.1