Strain Fitness in Variovorax sp. SCN45 around GFF4072

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
285,440	+		GFF4070	0.31	-1.0
285,440	+		GFF4070	0.31	+1.3
285,441	-		GFF4070	0.31	-0.1
285,441	-		GFF4070	0.31	-0.1
285,484	-		GFF4070	0.42	-0.7
285,553	+		GFF4070	0.60	-0.7
285,554	-		GFF4070	0.60	-1.9
285,767	+				-0.3
285,768	-				-0.7
286,059	-		GFF4071	0.65	-0.5
286,203	+				-0.4
286,204	-				-1.4
286,293	+				+0.4
286,469	+		GFF4072	0.40	+0.5
286,469	+		GFF4072	0.40	-1.0
286,469	+		GFF4072	0.40	+0.8
286,490	+		GFF4072	0.45	-0.0
286,491	-		GFF4072	0.45	-0.1
286,571	+		GFF4072	0.67	-0.5
287,230	+		GFF4073	0.38	+0.4
287,230	+		GFF4073	0.38	+0.2
287,231	-		GFF4073	0.38	-1.3