Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4060 and GFF4061 are separated by 946 nucleotides GFF4061 and GFF4062 are separated by 275 nucleotides
GFF4060 - hypothetical protein, at 273,847 to 274,296
GFF4060
GFF4061 - Multicopper oxidase, at 275,243 to 277,054
GFF4061
GFF4062 - Copper resistance protein B, at 277,330 to 278,247
GFF4062
Position (kb) 275
276
277
278 Strain fitness (log2 ratio) -2
-1
0
1
2 at 274.515 kb on + strand at 274.515 kb on + strand at 274.598 kb on - strand at 274.635 kb on - strand at 274.635 kb on - strand at 274.838 kb on + strand at 274.838 kb on + strand at 274.838 kb on + strand at 274.839 kb on - strand at 274.844 kb on + strand at 274.844 kb on + strand at 274.844 kb on + strand at 274.847 kb on - strand at 274.860 kb on + strand at 275.109 kb on + strand at 275.111 kb on + strand at 275.362 kb on + strand at 275.363 kb on - strand at 275.363 kb on - strand at 275.532 kb on + strand, within GFF4061 at 275.532 kb on + strand, within GFF4061 at 275.533 kb on - strand, within GFF4061 at 275.669 kb on + strand, within GFF4061 at 275.670 kb on - strand, within GFF4061 at 276.012 kb on - strand, within GFF4061 at 276.218 kb on + strand, within GFF4061 at 276.218 kb on + strand, within GFF4061 at 276.219 kb on - strand, within GFF4061 at 276.219 kb on - strand, within GFF4061 at 276.219 kb on - strand, within GFF4061 at 276.219 kb on - strand, within GFF4061 at 276.219 kb on - strand, within GFF4061 at 276.254 kb on + strand, within GFF4061 at 276.255 kb on - strand, within GFF4061 at 276.255 kb on - strand, within GFF4061 at 276.620 kb on - strand, within GFF4061 at 276.649 kb on - strand, within GFF4061 at 276.656 kb on + strand, within GFF4061 at 276.656 kb on + strand, within GFF4061 at 276.656 kb on + strand, within GFF4061 at 276.656 kb on + strand, within GFF4061 at 277.010 kb on + strand at 277.041 kb on + strand at 277.492 kb on - strand, within GFF4062 at 277.565 kb on - strand, within GFF4062 at 277.565 kb on - strand, within GFF4062 at 277.654 kb on + strand, within GFF4062 at 277.717 kb on + strand, within GFF4062 at 277.718 kb on - strand, within GFF4062 at 277.933 kb on + strand, within GFF4062 at 277.934 kb on - strand, within GFF4062 at 277.934 kb on - strand, within GFF4062 at 277.934 kb on - strand, within GFF4062 at 277.934 kb on - strand, within GFF4062 at 278.029 kb on - strand, within GFF4062 at 278.035 kb on + strand, within GFF4062 at 278.035 kb on + strand, within GFF4062
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 274,515 + -0.9 274,515 + +0.0 274,598 - -0.0 274,635 - +0.6 274,635 - +0.2 274,838 + +0.3 274,838 + -0.9 274,838 + -0.9 274,839 - +0.6 274,844 + +0.2 274,844 + -1.1 274,844 + -1.4 274,847 - -1.2 274,860 + -1.0 275,109 + -0.2 275,111 + -0.2 275,362 + -0.2 275,363 - +0.3 275,363 - +0.0 275,532 + GFF4061 0.16 -1.0 275,532 + GFF4061 0.16 +1.4 275,533 - GFF4061 0.16 -0.7 275,669 + GFF4061 0.24 -0.3 275,670 - GFF4061 0.24 -0.3 276,012 - GFF4061 0.42 +1.9 276,218 + GFF4061 0.54 +0.0 276,218 + GFF4061 0.54 +0.6 276,219 - GFF4061 0.54 -0.8 276,219 - GFF4061 0.54 +0.2 276,219 - GFF4061 0.54 +0.9 276,219 - GFF4061 0.54 +0.7 276,219 - GFF4061 0.54 +0.1 276,254 + GFF4061 0.56 -0.0 276,255 - GFF4061 0.56 -0.1 276,255 - GFF4061 0.56 +1.0 276,620 - GFF4061 0.76 -0.2 276,649 - GFF4061 0.78 -1.0 276,656 + GFF4061 0.78 -0.4 276,656 + GFF4061 0.78 -0.4 276,656 + GFF4061 0.78 +0.1 276,656 + GFF4061 0.78 +0.4 277,010 + -0.5 277,041 + +1.2 277,492 - GFF4062 0.18 +0.3 277,565 - GFF4062 0.26 +0.6 277,565 - GFF4062 0.26 +0.7 277,654 + GFF4062 0.35 -0.6 277,717 + GFF4062 0.42 +0.5 277,718 - GFF4062 0.42 -1.7 277,933 + GFF4062 0.66 +0.9 277,934 - GFF4062 0.66 +0.0 277,934 - GFF4062 0.66 -2.0 277,934 - GFF4062 0.66 +0.6 277,934 - GFF4062 0.66 -1.3 278,029 - GFF4062 0.76 +0.2 278,035 + GFF4062 0.77 +0.0 278,035 + GFF4062 0.77 -0.2
Or see this region's nucleotide sequence