Strain Fitness in Variovorax sp. SCN45 around GFF2694

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
121,636	-		GFF2693	0.16	-0.5
121,636	-		GFF2693	0.16	+1.6
121,665	+		GFF2693	0.19	-1.6
121,665	+		GFF2693	0.19	+0.4
121,734	+		GFF2693	0.25	-0.4
121,734	+		GFF2693	0.25	+0.5
121,734	+		GFF2693	0.25	-0.2
121,735	-		GFF2693	0.25	+2.3
121,735	-		GFF2693	0.25	-2.3
121,896	+		GFF2693	0.41	-0.2
121,897	-		GFF2693	0.42	+0.6
122,304	+		GFF2693	0.82	-0.3
122,304	+		GFF2693	0.82	+0.2
122,305	-		GFF2693	0.82	+0.0
122,583	-				-0.6
122,753	+		GFF2694	0.26	-0.1
122,754	-		GFF2694	0.27	-0.8
122,832	-		GFF2694	0.34	-0.3
123,206	+		GFF2694	0.71	-0.4
123,206	+		GFF2694	0.71	+0.2
123,206	+		GFF2694	0.71	+1.0
123,206	+		GFF2694	0.71	+1.9
123,207	-		GFF2694	0.71	+0.1
123,207	-		GFF2694	0.71	+0.3
123,207	-		GFF2694	0.71	-0.3
123,207	-		GFF2694	0.71	-0.7
123,505	-				-1.8
123,633	-				+1.3
123,758	+		GFF2695	0.22	-1.3
123,758	+		GFF2695	0.22	-0.7
123,759	-		GFF2695	0.22	-0.4
123,821	+		GFF2695	0.28	+0.4
123,822	-		GFF2695	0.29	-0.0
124,016	+		GFF2695	0.48	-2.0
124,016	+		GFF2695	0.48	-1.4
124,019	+		GFF2695	0.48	+0.4
124,094	+		GFF2695	0.55	-0.3
124,094	+		GFF2695	0.55	-0.5
124,095	-		GFF2695	0.56	-0.8
124,115	+		GFF2695	0.58	-0.1
124,115	+		GFF2695	0.58	+0.1
124,116	-		GFF2695	0.58	+0.1