Strain Fitness in Variovorax sp. SCN45 around GFF2484

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
541,142	+		GFF2483	0.46	-0.4
541,142	+		GFF2483	0.46	-0.7
541,142	+		GFF2483	0.46	+0.1
541,143	-		GFF2483	0.46	+0.5
541,143	-		GFF2483	0.46	-0.4
541,941	-				+0.4
541,961	+				-0.4
541,961	+				-1.0
542,005	+				+0.1
542,043	-				-0.2
542,255	-		GFF2484	0.61	-0.7
542,255	-		GFF2484	0.61	-0.7
543,219	+		GFF2486	0.69	+0.2