Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1486 and GFF1487 overlap by 4 nucleotides GFF1487 and GFF1488 are separated by 39 nucleotides
GFF1486 - Tetrapartite efflux system, inner membrane component FusBC-like, at 78,609 to 80,672
GFF1486
GFF1487 - Tetrapartite efflux system component, FusD-like, at 80,669 to 80,875
GFF1487
GFF1488 - Tetrapartite efflux system, membrane fusion component FusE-like, at 80,915 to 81,913
GFF1488
Position (kb) 80
81 Strain fitness (log2 ratio) -2
-1
0
1 at 79.726 kb on + strand, within GFF1486 at 79.726 kb on + strand, within GFF1486 at 79.726 kb on + strand, within GFF1486 at 79.727 kb on - strand, within GFF1486 at 80.013 kb on + strand, within GFF1486 at 80.013 kb on + strand, within GFF1486 at 80.013 kb on + strand, within GFF1486 at 80.215 kb on + strand, within GFF1486 at 80.215 kb on + strand, within GFF1486 at 80.216 kb on - strand, within GFF1486 at 80.216 kb on - strand, within GFF1486 at 80.287 kb on - strand, within GFF1486 at 80.696 kb on + strand, within GFF1487 at 80.696 kb on + strand, within GFF1487 at 80.696 kb on + strand, within GFF1487 at 80.696 kb on + strand, within GFF1487 at 80.696 kb on + strand, within GFF1487 at 80.696 kb on + strand, within GFF1487 at 80.697 kb on - strand, within GFF1487 at 80.697 kb on - strand, within GFF1487 at 80.822 kb on + strand, within GFF1487 at 80.822 kb on + strand, within GFF1487 at 81.510 kb on - strand, within GFF1488 at 81.561 kb on - strand, within GFF1488 at 81.561 kb on - strand, within GFF1488 at 81.834 kb on + strand at 81.835 kb on - strand at 81.835 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 79,726 + GFF1486 0.54 +1.5 79,726 + GFF1486 0.54 -0.0 79,726 + GFF1486 0.54 -0.4 79,727 - GFF1486 0.54 +0.2 80,013 + GFF1486 0.68 -1.7 80,013 + GFF1486 0.68 -0.1 80,013 + GFF1486 0.68 +0.1 80,215 + GFF1486 0.78 +0.4 80,215 + GFF1486 0.78 +0.0 80,216 - GFF1486 0.78 -0.2 80,216 - GFF1486 0.78 -1.2 80,287 - GFF1486 0.81 -0.4 80,696 + GFF1487 0.13 -0.3 80,696 + GFF1487 0.13 +0.1 80,696 + GFF1487 0.13 -1.2 80,696 + GFF1487 0.13 -0.4 80,696 + GFF1487 0.13 -0.2 80,696 + GFF1487 0.13 -1.3 80,697 - GFF1487 0.14 +0.1 80,697 - GFF1487 0.14 -0.3 80,822 + GFF1487 0.74 -1.6 80,822 + GFF1487 0.74 -2.3 81,510 - GFF1488 0.60 +0.8 81,561 - GFF1488 0.65 -0.1 81,561 - GFF1488 0.65 -0.4 81,834 + +0.6 81,835 - -0.2 81,835 - -0.4
Or see this region's nucleotide sequence