Strain Fitness in Variovorax sp. SCN45 around GFF133

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
160,681	+		GFF132	0.20	-0.8
160,682	-		GFF132	0.20	-1.2
160,684	+		GFF132	0.20	-0.4
160,684	+		GFF132	0.20	+0.2
160,996	+		GFF132	0.52	-0.2
160,996	+		GFF132	0.52	-0.3
160,997	-		GFF132	0.52	-1.6
161,008	+		GFF132	0.53	-0.1
161,008	+		GFF132	0.53	-0.2
161,008	+		GFF132	0.53	+1.3
161,009	-		GFF132	0.54	-1.8
161,009	-		GFF132	0.54	-0.4
161,170	+		GFF132	0.70	+0.3
161,170	+		GFF132	0.70	+0.3
161,580	+		GFF133	0.26	+0.3
161,581	-		GFF133	0.26	+0.9
161,655	+		GFF133	0.48	+0.1
161,676	+		GFF133	0.55	-0.6
161,676	+		GFF133	0.55	+0.1
161,972	+				-0.3
161,973	-				-0.0
162,389	+		GFF134	0.35	-0.3
162,680	+		GFF134	0.53	-0.5
162,681	-		GFF134	0.53	+0.6