Strain Fitness in Variovorax sp. SCN45 around GFF7242

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
22,401	+		GFF7240	0.86	-1.1
22,401	+		GFF7240	0.86	-0.1
22,402	-		GFF7240	0.86	-0.4
22,895	+		GFF7241	0.21	-0.1
22,895	+		GFF7241	0.21	-0.4
22,895	+		GFF7241	0.21	-0.7
22,896	-		GFF7241	0.22	-2.5
23,094	-		GFF7241	0.63	+0.3
23,401	+		GFF7242	0.31	-1.7
23,771	-				-0.3
24,346	+		GFF7243	0.48	+1.1
24,346	+		GFF7243	0.48	-0.3
24,433	+		GFF7243	0.55	-1.3
24,433	+		GFF7243	0.55	+1.3
24,433	+		GFF7243	0.55	+0.5
24,433	+		GFF7243	0.55	+0.6
24,434	-		GFF7243	0.55	+0.3
24,434	-		GFF7243	0.55	-0.3
24,451	+		GFF7243	0.56	+0.1
24,451	+		GFF7243	0.56	-0.5
24,452	-		GFF7243	0.56	+1.1