Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7076 and GFF7077 overlap by 4 nucleotides GFF7077 and GFF7078 are separated by 141 nucleotides GFF7078 and GFF7079 are separated by 11 nucleotides GFF7079 and GFF7080 are separated by 66 nucleotides
GFF7076 - no description, at 2 to 136
GFF7076
GFF7077 - no description, at 133 to 534
GFF7077
GFF7078 - no description, at 676 to 840
GFF7078
GFF7079 - hypothetical protein, at 852 to 1,181
GFF7079
GFF7080 - no description, at 1,248 to 1,496
GFF7080
Position (kb) 0
1 Strain fitness (log2 ratio) -2
-1
0
1
2 at 0.110 kb on + strand, within GFF7076 at 0.110 kb on + strand, within GFF7076 at 0.111 kb on - strand, within GFF7076 at 0.354 kb on + strand, within GFF7077 at 0.354 kb on + strand, within GFF7077 at 0.534 kb on + strand at 0.534 kb on + strand at 0.534 kb on + strand at 0.534 kb on + strand at 0.534 kb on + strand at 0.534 kb on + strand at 0.535 kb on - strand at 0.535 kb on - strand at 0.535 kb on - strand at 0.535 kb on - strand at 0.535 kb on - strand at 0.535 kb on - strand at 0.535 kb on - strand at 0.551 kb on + strand at 0.551 kb on + strand at 0.551 kb on + strand at 0.551 kb on + strand at 0.552 kb on - strand at 0.673 kb on + strand at 0.673 kb on + strand at 0.673 kb on + strand at 0.673 kb on + strand at 0.674 kb on - strand at 0.773 kb on - strand, within GFF7078 at 0.773 kb on - strand, within GFF7078 at 0.851 kb on + strand at 0.851 kb on + strand at 0.851 kb on + strand at 0.851 kb on + strand at 0.852 kb on - strand at 0.852 kb on - strand at 0.871 kb on - strand at 0.871 kb on - strand at 0.997 kb on - strand, within GFF7079 at 1.158 kb on + strand at 1.159 kb on - strand at 1.159 kb on - strand at 1.180 kb on - strand at 1.219 kb on + strand at 1.219 kb on + strand at 1.219 kb on + strand at 1.220 kb on - strand at 1.220 kb on - strand at 1.319 kb on + strand, within GFF7080 at 1.355 kb on + strand, within GFF7080 at 1.355 kb on + strand, within GFF7080 at 1.355 kb on + strand, within GFF7080 at 1.356 kb on - strand, within GFF7080 at 1.356 kb on - strand, within GFF7080 at 1.356 kb on - strand, within GFF7080 at 1.356 kb on - strand, within GFF7080 at 1.402 kb on + strand, within GFF7080 at 1.402 kb on + strand, within GFF7080 at 1.402 kb on + strand, within GFF7080 at 1.526 kb on + strand at 1.526 kb on + strand at 1.527 kb on - strand at 1.527 kb on - strand at 1.527 kb on - strand at 1.527 kb on - strand at 1.527 kb on - strand at 1.527 kb on - strand at 1.527 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 110 + GFF7076 0.80 -0.8 110 + GFF7076 0.80 -1.3 111 - GFF7076 0.81 +2.2 354 + GFF7077 0.55 -1.2 354 + GFF7077 0.55 +0.6 534 + -0.1 534 + -0.2 534 + +0.4 534 + -0.2 534 + -0.6 534 + +0.4 535 - -1.0 535 - +2.4 535 - -0.7 535 - +2.2 535 - -0.4 535 - -0.3 535 - -0.0 551 + -0.3 551 + +0.2 551 + -0.5 551 + -0.1 552 - -1.8 673 + -0.4 673 + -1.4 673 + -0.4 673 + -0.3 674 - +0.6 773 - GFF7078 0.59 -0.3 773 - GFF7078 0.59 -0.7 851 + +0.3 851 + -1.2 851 + +0.0 851 + -0.1 852 - +0.1 852 - -0.2 871 - +2.2 871 - +0.1 997 - GFF7079 0.44 +0.6 1,158 + -1.1 1,159 - -0.8 1,159 - -1.5 1,180 - -0.7 1,219 + +2.2 1,219 + -0.3 1,219 + +0.0 1,220 - -0.0 1,220 - -2.3 1,319 + GFF7080 0.29 +0.3 1,355 + GFF7080 0.43 +1.1 1,355 + GFF7080 0.43 -0.2 1,355 + GFF7080 0.43 +0.7 1,356 - GFF7080 0.43 +0.1 1,356 - GFF7080 0.43 +0.2 1,356 - GFF7080 0.43 -2.1 1,356 - GFF7080 0.43 -0.7 1,402 + GFF7080 0.62 -0.8 1,402 + GFF7080 0.62 +1.2 1,402 + GFF7080 0.62 +0.3 1,526 + -0.6 1,526 + -0.7 1,527 - +0.2 1,527 - -0.6 1,527 - -0.8 1,527 - -0.4 1,527 - -1.3 1,527 - -2.2 1,527 - -0.1
Or see this region's nucleotide sequence