Strain Fitness in Variovorax sp. SCN45 around GFF6204

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
110,418	+		GFF6203	0.17	+0.8
110,418	+		GFF6203	0.17	-0.0
110,419	-		GFF6203	0.18	-1.6
110,419	-		GFF6203	0.18	-0.6
110,568	+		GFF6203	0.33	-1.0
110,568	+		GFF6203	0.33	+0.3
110,568	+		GFF6203	0.33	-1.5
110,569	-		GFF6203	0.33	-1.0
110,686	-		GFF6203	0.45	+0.8
110,818	-		GFF6203	0.58	-0.6
111,270	+				-0.1
111,270	+				-0.8
111,275	+				-0.6
111,275	+				+0.0
111,276	-				+0.4
111,705	+		GFF6204	0.23	+0.8
111,705	+		GFF6204	0.23	-1.3
111,744	+		GFF6204	0.25	-2.7
111,851	+		GFF6204	0.31	-0.6
111,852	-		GFF6204	0.31	+0.0
111,906	+		GFF6204	0.34	-2.5
111,906	+		GFF6204	0.34	+1.4
111,907	-		GFF6204	0.34	-0.6
112,069	-		GFF6204	0.44	-0.5
112,365	+		GFF6204	0.60	+0.0
112,365	+		GFF6204	0.60	+0.8
112,366	-		GFF6204	0.60	-0.4
112,366	-		GFF6204	0.60	-0.8
113,360	-		GFF6205	0.29	-0.0
113,840	-				-0.8
113,955	+		GFF6206	0.25	+0.2