Strain Fitness in Variovorax sp. SCN45 around GFF4331

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
252,913	+				-0.6
252,913	+				-0.9
252,947	+				+1.0
253,033	+				-1.8
253,034	-				+0.7
253,052	-				-0.2
253,052	-				-0.3
253,062	+				-0.8
253,114	+				-0.5
253,114	+				+0.9
253,217	-				-0.9
253,254	+				-1.0
253,255	-				-0.4
253,255	-				+0.5
253,255	-				-0.3
253,262	+				-1.0
253,262	+				-0.6
253,434	-		GFF4331	0.11	+0.6
253,541	+		GFF4331	0.18	-0.8
253,541	+		GFF4331	0.18	+0.7
253,541	+		GFF4331	0.18	-0.2
253,566	-		GFF4331	0.19	+0.5
253,604	+		GFF4331	0.21	+0.5
253,604	+		GFF4331	0.21	+0.3
253,811	+		GFF4331	0.33	-0.6
254,694	-		GFF4331	0.84	-1.6
254,928	+				-0.1
255,035	-				-0.6
255,039	-				-0.1
255,336	-		GFF4332	0.19	+0.7
255,336	-		GFF4332	0.19	+0.7
255,431	+		GFF4332	0.25	+2.4
255,501	-		GFF4332	0.30	-0.5
255,501	-		GFF4332	0.30	-1.0
255,799	-		GFF4332	0.50	-0.6