Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2829 and GFF2830 are separated by 55 nucleotides GFF2830 and GFF2831 are separated by 14 nucleotides GFF2831 and GFF2832 overlap by 4 nucleotides
GFF2829 - Uncharacterized protein CC_3060, at 256,920 to 257,420
GFF2829
GFF2830 - Uncharacterized protein CC_3061, at 257,476 to 258,285
GFF2830
GFF2831 - FAD:protein FMN transferase (EC 2.7.1.180) @ FAD:protein FMN transferase (EC 2.7.1.180), CC_3059-CC_3061-associated, at 258,300 to 259,304
GFF2831
GFF2832 - Uncharacterized protein PA4513, at 259,301 to 260,668
GFF2832
Position (kb) 258
259
260 Strain fitness (log2 ratio) -2
-1
0
1
2 at 257.398 kb on + strand at 257.738 kb on + strand, within GFF2830 at 257.738 kb on + strand, within GFF2830 at 257.738 kb on + strand, within GFF2830 at 257.738 kb on + strand, within GFF2830 at 257.738 kb on + strand, within GFF2830 at 257.738 kb on + strand, within GFF2830 at 257.738 kb on + strand, within GFF2830 at 257.738 kb on + strand, within GFF2830 at 257.738 kb on + strand, within GFF2830 at 257.739 kb on - strand, within GFF2830 at 257.739 kb on - strand, within GFF2830 at 257.739 kb on - strand, within GFF2830 at 257.739 kb on - strand, within GFF2830 at 257.739 kb on - strand, within GFF2830 at 257.739 kb on - strand, within GFF2830 at 257.739 kb on - strand, within GFF2830 at 257.739 kb on - strand, within GFF2830 at 257.770 kb on + strand, within GFF2830 at 257.770 kb on + strand, within GFF2830 at 257.770 kb on + strand, within GFF2830 at 257.770 kb on + strand, within GFF2830 at 257.771 kb on - strand, within GFF2830 at 257.771 kb on - strand, within GFF2830 at 257.771 kb on - strand, within GFF2830 at 257.771 kb on - strand, within GFF2830 at 257.771 kb on - strand, within GFF2830 at 257.771 kb on - strand, within GFF2830 at 257.771 kb on - strand, within GFF2830 at 257.771 kb on - strand, within GFF2830 at 257.771 kb on - strand, within GFF2830 at 257.771 kb on - strand, within GFF2830 at 257.771 kb on - strand, within GFF2830 at 257.771 kb on - strand, within GFF2830 at 258.106 kb on + strand, within GFF2830 at 258.106 kb on + strand, within GFF2830 at 258.106 kb on + strand, within GFF2830 at 258.107 kb on - strand, within GFF2830 at 258.107 kb on - strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.187 kb on + strand, within GFF2830 at 258.188 kb on - strand, within GFF2830 at 258.188 kb on - strand, within GFF2830 at 258.188 kb on - strand, within GFF2830 at 258.188 kb on - strand, within GFF2830 at 258.188 kb on - strand, within GFF2830 at 258.188 kb on - strand, within GFF2830 at 258.188 kb on - strand, within GFF2830 at 258.188 kb on - strand, within GFF2830 at 258.188 kb on - strand, within GFF2830 at 258.188 kb on - strand, within GFF2830 at 258.188 kb on - strand, within GFF2830 at 258.188 kb on - strand, within GFF2830 at 258.188 kb on - strand, within GFF2830 at 258.188 kb on - strand, within GFF2830 at 258.189 kb on - strand, within GFF2830 at 258.256 kb on + strand at 258.256 kb on + strand at 258.257 kb on - strand at 258.257 kb on - strand at 258.257 kb on - strand at 258.336 kb on + strand at 258.336 kb on + strand at 258.337 kb on - strand at 258.488 kb on + strand, within GFF2831 at 258.488 kb on + strand, within GFF2831 at 258.488 kb on + strand, within GFF2831 at 258.854 kb on + strand, within GFF2831 at 259.353 kb on - strand at 259.353 kb on - strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.376 kb on + strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.377 kb on - strand at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.456 kb on + strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.457 kb on - strand, within GFF2832 at 259.552 kb on + strand, within GFF2832 at 259.622 kb on + strand, within GFF2832 at 259.622 kb on + strand, within GFF2832 at 259.622 kb on + strand, within GFF2832 at 259.622 kb on + strand, within GFF2832 at 259.623 kb on - strand, within GFF2832 at 259.623 kb on - strand, within GFF2832 at 259.623 kb on - strand, within GFF2832 at 259.623 kb on - strand, within GFF2832 at 259.623 kb on - strand, within GFF2832 at 259.623 kb on - strand, within GFF2832 at 259.623 kb on - strand, within GFF2832 at 259.623 kb on - strand, within GFF2832 at 259.701 kb on + strand, within GFF2832 at 259.701 kb on + strand, within GFF2832 at 259.707 kb on - strand, within GFF2832 at 259.707 kb on - strand, within GFF2832 at 259.736 kb on + strand, within GFF2832 at 259.736 kb on + strand, within GFF2832 at 259.736 kb on + strand, within GFF2832 at 259.737 kb on - strand, within GFF2832 at 259.737 kb on - strand, within GFF2832 at 259.737 kb on - strand, within GFF2832 at 259.885 kb on - strand, within GFF2832 at 259.885 kb on - strand, within GFF2832 at 260.078 kb on + strand, within GFF2832 at 260.078 kb on + strand, within GFF2832 at 260.078 kb on + strand, within GFF2832 at 260.078 kb on + strand, within GFF2832 at 260.079 kb on - strand, within GFF2832 at 260.079 kb on - strand, within GFF2832
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 257,398 + +0.7 257,738 + GFF2830 0.32 -0.3 257,738 + GFF2830 0.32 +0.6 257,738 + GFF2830 0.32 +0.1 257,738 + GFF2830 0.32 -0.6 257,738 + GFF2830 0.32 +0.0 257,738 + GFF2830 0.32 -0.3 257,738 + GFF2830 0.32 -1.3 257,738 + GFF2830 0.32 -0.7 257,738 + GFF2830 0.32 +1.2 257,739 - GFF2830 0.32 +0.4 257,739 - GFF2830 0.32 -0.2 257,739 - GFF2830 0.32 -0.8 257,739 - GFF2830 0.32 -0.7 257,739 - GFF2830 0.32 +0.5 257,739 - GFF2830 0.32 -0.7 257,739 - GFF2830 0.32 -1.0 257,739 - GFF2830 0.32 +0.6 257,770 + GFF2830 0.36 -1.3 257,770 + GFF2830 0.36 -0.7 257,770 + GFF2830 0.36 +0.1 257,770 + GFF2830 0.36 +0.8 257,771 - GFF2830 0.36 +0.4 257,771 - GFF2830 0.36 -1.0 257,771 - GFF2830 0.36 +0.9 257,771 - GFF2830 0.36 -0.3 257,771 - GFF2830 0.36 -0.1 257,771 - GFF2830 0.36 +0.5 257,771 - GFF2830 0.36 +0.4 257,771 - GFF2830 0.36 +0.1 257,771 - GFF2830 0.36 +1.4 257,771 - GFF2830 0.36 -0.3 257,771 - GFF2830 0.36 -0.4 257,771 - GFF2830 0.36 -1.8 258,106 + GFF2830 0.78 -0.5 258,106 + GFF2830 0.78 -0.5 258,106 + GFF2830 0.78 -0.7 258,107 - GFF2830 0.78 -0.7 258,107 - GFF2830 0.78 +0.2 258,187 + GFF2830 0.88 -0.9 258,187 + GFF2830 0.88 -0.9 258,187 + GFF2830 0.88 -0.7 258,187 + GFF2830 0.88 -1.0 258,187 + GFF2830 0.88 -0.0 258,187 + GFF2830 0.88 +0.0 258,187 + GFF2830 0.88 +1.0 258,187 + GFF2830 0.88 -0.2 258,187 + GFF2830 0.88 -0.7 258,187 + GFF2830 0.88 -0.6 258,187 + GFF2830 0.88 +0.2 258,187 + GFF2830 0.88 -0.0 258,187 + GFF2830 0.88 +0.1 258,187 + GFF2830 0.88 -0.4 258,187 + GFF2830 0.88 +0.1 258,187 + GFF2830 0.88 -0.1 258,187 + GFF2830 0.88 -0.3 258,187 + GFF2830 0.88 -1.1 258,187 + GFF2830 0.88 -0.2 258,187 + GFF2830 0.88 -0.8 258,187 + GFF2830 0.88 -0.7 258,187 + GFF2830 0.88 -0.5 258,187 + GFF2830 0.88 -0.2 258,187 + GFF2830 0.88 -1.8 258,187 + GFF2830 0.88 -0.2 258,187 + GFF2830 0.88 +0.2 258,187 + GFF2830 0.88 +0.4 258,187 + GFF2830 0.88 -0.3 258,187 + GFF2830 0.88 -1.1 258,187 + GFF2830 0.88 +0.0 258,187 + GFF2830 0.88 -0.5 258,187 + GFF2830 0.88 +0.1 258,188 - GFF2830 0.88 -1.2 258,188 - GFF2830 0.88 +1.0 258,188 - GFF2830 0.88 -0.1 258,188 - GFF2830 0.88 +0.3 258,188 - GFF2830 0.88 +0.9 258,188 - GFF2830 0.88 -1.8 258,188 - GFF2830 0.88 -2.2 258,188 - GFF2830 0.88 -0.0 258,188 - GFF2830 0.88 -0.0 258,188 - GFF2830 0.88 -0.1 258,188 - GFF2830 0.88 -0.1 258,188 - GFF2830 0.88 -0.3 258,188 - GFF2830 0.88 +0.1 258,188 - GFF2830 0.88 -1.3 258,189 - GFF2830 0.88 +1.4 258,256 + -0.7 258,256 + +0.3 258,257 - -1.1 258,257 - -0.0 258,257 - -1.2 258,336 + +1.1 258,336 + -0.6 258,337 - +1.3 258,488 + GFF2831 0.19 +0.5 258,488 + GFF2831 0.19 -1.3 258,488 + GFF2831 0.19 -2.1 258,854 + GFF2831 0.55 -0.9 259,353 - +0.3 259,353 - +0.2 259,376 + +0.1 259,376 + +0.2 259,376 + -0.3 259,376 + -1.5 259,376 + -0.4 259,376 + -1.1 259,376 + -2.2 259,376 + -0.1 259,376 + -0.5 259,376 + -0.5 259,376 + -0.1 259,376 + +0.0 259,376 + +1.4 259,376 + -0.1 259,376 + +0.2 259,376 + +0.9 259,376 + -0.2 259,376 + -0.1 259,376 + -0.0 259,376 + +0.5 259,376 + -0.4 259,376 + -0.1 259,376 + -0.8 259,376 + +0.5 259,376 + -1.1 259,376 + -0.4 259,376 + +0.6 259,376 + -0.4 259,376 + -0.7 259,377 - -2.1 259,377 - +0.0 259,377 - +0.2 259,377 - -0.1 259,377 - -0.2 259,377 - -0.0 259,377 - +0.6 259,377 - +0.0 259,377 - +0.3 259,377 - +0.6 259,377 - -0.3 259,377 - +0.9 259,377 - +0.9 259,377 - -0.3 259,377 - -0.9 259,377 - -0.6 259,377 - +0.5 259,377 - -0.4 259,377 - -0.4 259,377 - -0.3 259,377 - -0.3 259,377 - +0.5 259,377 - -1.5 259,377 - -0.6 259,377 - -0.1 259,377 - +0.0 259,377 - +0.9 259,377 - -0.2 259,377 - -1.8 259,377 - +0.4 259,377 - -2.0 259,377 - +0.3 259,377 - -0.1 259,377 - -0.9 259,377 - -0.6 259,377 - +0.1 259,456 + GFF2832 0.11 -1.3 259,456 + GFF2832 0.11 +1.0 259,456 + GFF2832 0.11 -0.9 259,456 + GFF2832 0.11 +0.3 259,456 + GFF2832 0.11 +0.1 259,456 + GFF2832 0.11 +0.9 259,456 + GFF2832 0.11 -0.1 259,456 + GFF2832 0.11 -0.1 259,456 + GFF2832 0.11 +0.2 259,456 + GFF2832 0.11 +1.5 259,456 + GFF2832 0.11 +0.4 259,456 + GFF2832 0.11 +0.3 259,456 + GFF2832 0.11 -0.5 259,456 + GFF2832 0.11 +0.6 259,456 + GFF2832 0.11 -0.8 259,456 + GFF2832 0.11 +0.5 259,456 + GFF2832 0.11 -0.1 259,456 + GFF2832 0.11 +0.2 259,456 + GFF2832 0.11 +1.2 259,456 + GFF2832 0.11 -0.1 259,456 + GFF2832 0.11 -0.0 259,456 + GFF2832 0.11 -0.1 259,456 + GFF2832 0.11 +0.0 259,457 - GFF2832 0.11 +1.6 259,457 - GFF2832 0.11 +0.0 259,457 - GFF2832 0.11 +0.4 259,457 - GFF2832 0.11 +0.1 259,457 - GFF2832 0.11 -0.3 259,457 - GFF2832 0.11 -2.5 259,457 - GFF2832 0.11 -0.1 259,457 - GFF2832 0.11 -0.1 259,457 - GFF2832 0.11 +1.2 259,457 - GFF2832 0.11 -0.6 259,457 - GFF2832 0.11 -2.1 259,457 - GFF2832 0.11 +0.3 259,457 - GFF2832 0.11 -0.1 259,457 - GFF2832 0.11 -0.7 259,457 - GFF2832 0.11 -0.1 259,457 - GFF2832 0.11 +0.7 259,457 - GFF2832 0.11 +0.2 259,457 - GFF2832 0.11 +0.1 259,457 - GFF2832 0.11 +0.0 259,457 - GFF2832 0.11 -2.6 259,457 - GFF2832 0.11 -0.0 259,552 + GFF2832 0.18 -0.7 259,622 + GFF2832 0.23 +0.4 259,622 + GFF2832 0.23 -0.2 259,622 + GFF2832 0.23 +0.4 259,622 + GFF2832 0.23 +0.0 259,623 - GFF2832 0.24 -0.3 259,623 - GFF2832 0.24 -0.8 259,623 - GFF2832 0.24 -0.5 259,623 - GFF2832 0.24 +0.2 259,623 - GFF2832 0.24 +2.1 259,623 - GFF2832 0.24 -2.0 259,623 - GFF2832 0.24 -1.8 259,623 - GFF2832 0.24 +1.0 259,701 + GFF2832 0.29 -0.1 259,701 + GFF2832 0.29 +0.7 259,707 - GFF2832 0.30 -0.3 259,707 - GFF2832 0.30 -0.1 259,736 + GFF2832 0.32 -0.9 259,736 + GFF2832 0.32 +0.1 259,736 + GFF2832 0.32 +0.4 259,737 - GFF2832 0.32 -0.6 259,737 - GFF2832 0.32 +1.9 259,737 - GFF2832 0.32 -2.1 259,885 - GFF2832 0.43 +0.6 259,885 - GFF2832 0.43 -1.6 260,078 + GFF2832 0.57 +0.3 260,078 + GFF2832 0.57 +1.2 260,078 + GFF2832 0.57 +0.2 260,078 + GFF2832 0.57 -0.9 260,079 - GFF2832 0.57 +0.2 260,079 - GFF2832 0.57 -2.1
Or see this region's nucleotide sequence