Strain Fitness in Variovorax sp. SCN45 around GFF2711

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
142,184	+				-0.1
142,184	+				-0.2
142,184	+				-1.5
142,184	+				-0.7
142,185	-				-1.1
142,185	-				-0.2
142,369	+				+1.9
142,369	+				+0.1
142,369	+				-0.7
142,369	+				-1.3
142,370	-				-1.1
142,370	-				+0.3
142,370	-				-0.1
142,370	-				-0.3
142,370	-				-0.2
142,424	-		GFF2710	0.13	-1.0
143,108	+		GFF2711	0.44	-0.1
143,171	+		GFF2711	0.56	+0.6
143,171	+		GFF2711	0.56	-1.3
143,171	+		GFF2711	0.56	-1.9
143,171	+		GFF2711	0.56	-1.6
143,172	-		GFF2711	0.56	+1.2
143,414	-				-0.4
143,492	+				-0.6
143,509	+				+0.7
143,509	+				-0.2
143,634	+		GFF2712	0.14	+0.3
143,634	+		GFF2712	0.14	-0.2
143,634	+		GFF2712	0.14	+0.5
143,634	+		GFF2712	0.14	+0.2
143,716	+		GFF2712	0.27	-0.4
144,017	+		GFF2712	0.73	-0.3
144,018	-		GFF2712	0.73	+0.6
144,020	+		GFF2712	0.74	-1.2
144,020	+		GFF2712	0.74	-0.3
144,303	+				+1.2
144,303	+				-0.0
144,303	+				-1.8