Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2202 and GFF2203 overlap by 4 nucleotides GFF2203 and GFF2204 are separated by 34 nucleotides GFF2204 and GFF2205 are separated by 146 nucleotides
GFF2202 - hypothetical protein, at 265,218 to 265,712
GFF2202
GFF2203 - no description, at 265,709 to 266,182
GFF2203
GFF2204 - no description, at 266,217 to 266,450
GFF2204
GFF2205 - hypothetical protein, at 266,597 to 267,580
GFF2205
Position (kb) 266
267 Strain fitness (log2 ratio) -2
-1
0
1
2 at 265.321 kb on + strand, within GFF2202 at 265.469 kb on - strand, within GFF2202 at 265.569 kb on + strand, within GFF2202 at 265.569 kb on + strand, within GFF2202 at 265.569 kb on + strand, within GFF2202 at 265.569 kb on + strand, within GFF2202 at 265.569 kb on + strand, within GFF2202 at 265.570 kb on - strand, within GFF2202 at 265.570 kb on - strand, within GFF2202 at 265.570 kb on - strand, within GFF2202 at 265.570 kb on - strand, within GFF2202 at 265.570 kb on - strand, within GFF2202 at 265.570 kb on - strand, within GFF2202 at 265.570 kb on - strand, within GFF2202 at 265.573 kb on + strand, within GFF2202 at 265.573 kb on + strand, within GFF2202 at 265.574 kb on - strand, within GFF2202 at 265.574 kb on - strand, within GFF2202 at 265.574 kb on - strand, within GFF2202 at 265.574 kb on - strand, within GFF2202 at 265.575 kb on + strand, within GFF2202 at 265.575 kb on + strand, within GFF2202 at 265.575 kb on + strand, within GFF2202 at 265.575 kb on + strand, within GFF2202 at 265.575 kb on + strand, within GFF2202 at 265.575 kb on + strand, within GFF2202 at 265.575 kb on + strand, within GFF2202 at 265.576 kb on - strand, within GFF2202 at 265.576 kb on - strand, within GFF2202 at 265.576 kb on - strand, within GFF2202 at 265.576 kb on - strand, within GFF2202 at 265.603 kb on + strand, within GFF2202 at 265.790 kb on + strand, within GFF2203 at 265.985 kb on + strand, within GFF2203 at 265.990 kb on + strand, within GFF2203 at 265.999 kb on - strand, within GFF2203 at 266.071 kb on - strand, within GFF2203 at 266.311 kb on + strand, within GFF2204 at 266.311 kb on + strand, within GFF2204 at 266.312 kb on - strand, within GFF2204 at 266.425 kb on + strand, within GFF2204 at 266.606 kb on - strand at 266.937 kb on + strand, within GFF2205 at 267.120 kb on + strand, within GFF2205 at 267.196 kb on + strand, within GFF2205 at 267.197 kb on - strand, within GFF2205 at 267.197 kb on - strand, within GFF2205 at 267.198 kb on + strand, within GFF2205 at 267.198 kb on + strand, within GFF2205 at 267.199 kb on - strand, within GFF2205 at 267.199 kb on - strand, within GFF2205 at 267.360 kb on + strand, within GFF2205 at 267.360 kb on + strand, within GFF2205 at 267.360 kb on + strand, within GFF2205
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 265,321 + GFF2202 0.21 +0.8 265,469 - GFF2202 0.51 +1.1 265,569 + GFF2202 0.71 -0.4 265,569 + GFF2202 0.71 -0.7 265,569 + GFF2202 0.71 +1.5 265,569 + GFF2202 0.71 -0.3 265,569 + GFF2202 0.71 +0.3 265,570 - GFF2202 0.71 -1.0 265,570 - GFF2202 0.71 -1.2 265,570 - GFF2202 0.71 -1.5 265,570 - GFF2202 0.71 +1.4 265,570 - GFF2202 0.71 -1.9 265,570 - GFF2202 0.71 +0.5 265,570 - GFF2202 0.71 -0.6 265,573 + GFF2202 0.72 -0.8 265,573 + GFF2202 0.72 -0.2 265,574 - GFF2202 0.72 -0.3 265,574 - GFF2202 0.72 +1.5 265,574 - GFF2202 0.72 +0.2 265,574 - GFF2202 0.72 -0.8 265,575 + GFF2202 0.72 +0.6 265,575 + GFF2202 0.72 -0.4 265,575 + GFF2202 0.72 +1.5 265,575 + GFF2202 0.72 +0.1 265,575 + GFF2202 0.72 -0.9 265,575 + GFF2202 0.72 +1.1 265,575 + GFF2202 0.72 -0.4 265,576 - GFF2202 0.72 +0.2 265,576 - GFF2202 0.72 -0.3 265,576 - GFF2202 0.72 +0.0 265,576 - GFF2202 0.72 +1.7 265,603 + GFF2202 0.78 +0.1 265,790 + GFF2203 0.17 -0.2 265,985 + GFF2203 0.58 -0.2 265,990 + GFF2203 0.59 -0.8 265,999 - GFF2203 0.61 -0.5 266,071 - GFF2203 0.76 +0.3 266,311 + GFF2204 0.40 +0.9 266,311 + GFF2204 0.40 -0.2 266,312 - GFF2204 0.41 +1.9 266,425 + GFF2204 0.89 +1.7 266,606 - -1.8 266,937 + GFF2205 0.35 -2.3 267,120 + GFF2205 0.53 +0.5 267,196 + GFF2205 0.61 -1.5 267,197 - GFF2205 0.61 +1.3 267,197 - GFF2205 0.61 -2.6 267,198 + GFF2205 0.61 +0.5 267,198 + GFF2205 0.61 +0.2 267,199 - GFF2205 0.61 -0.6 267,199 - GFF2205 0.61 -1.5 267,360 + GFF2205 0.78 +0.1 267,360 + GFF2205 0.78 +0.9 267,360 + GFF2205 0.78 -1.7
Or see this region's nucleotide sequence