Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1794 and GFF1795 are separated by 28 nucleotides GFF1795 and GFF1796 are separated by 68 nucleotides GFF1796 and GFF1797 are separated by 217 nucleotides
GFF1794 - hypothetical protein, at 454,933 to 455,994
GFF1794
GFF1795 - Hydantoin racemase (EC 5.1.99.5), at 456,023 to 456,814
GFF1795
GFF1796 - NADP-dependent malic enzyme (EC 1.1.1.40), at 456,883 to 459,186
GFF1796
GFF1797 - FIG022199: FAD-binding protein, at 459,404 to 460,741
GFF1797
Position (kb) 456
457
458
459
460 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 455.935 kb on + strand at 456.068 kb on + strand at 456.068 kb on + strand at 456.068 kb on + strand at 456.068 kb on + strand at 456.068 kb on + strand at 456.068 kb on + strand at 456.068 kb on + strand at 456.069 kb on - strand at 456.069 kb on - strand at 456.069 kb on - strand at 456.069 kb on - strand at 456.069 kb on - strand at 456.069 kb on - strand at 456.069 kb on - strand at 456.170 kb on + strand, within GFF1795 at 456.179 kb on + strand, within GFF1795 at 456.179 kb on + strand, within GFF1795 at 456.179 kb on + strand, within GFF1795 at 456.179 kb on + strand, within GFF1795 at 456.266 kb on + strand, within GFF1795 at 456.266 kb on + strand, within GFF1795 at 456.267 kb on - strand, within GFF1795 at 456.267 kb on - strand, within GFF1795 at 456.267 kb on - strand, within GFF1795 at 456.600 kb on - strand, within GFF1795 at 456.600 kb on - strand, within GFF1795 at 456.682 kb on + strand, within GFF1795 at 456.683 kb on - strand, within GFF1795 at 456.884 kb on + strand at 456.884 kb on + strand at 456.884 kb on + strand at 456.884 kb on + strand at 456.885 kb on - strand at 456.885 kb on - strand at 456.885 kb on - strand at 456.885 kb on - strand at 457.043 kb on + strand at 457.043 kb on + strand at 457.043 kb on + strand at 457.043 kb on + strand at 457.043 kb on + strand at 457.043 kb on + strand at 457.044 kb on - strand at 457.044 kb on - strand at 457.044 kb on - strand at 457.044 kb on - strand at 457.044 kb on - strand at 457.253 kb on + strand, within GFF1796 at 457.253 kb on + strand, within GFF1796 at 457.253 kb on + strand, within GFF1796 at 457.253 kb on + strand, within GFF1796 at 457.254 kb on - strand, within GFF1796 at 457.254 kb on - strand, within GFF1796 at 457.634 kb on + strand, within GFF1796 at 457.634 kb on + strand, within GFF1796 at 457.634 kb on + strand, within GFF1796 at 457.634 kb on + strand, within GFF1796 at 457.635 kb on - strand, within GFF1796 at 457.635 kb on - strand, within GFF1796 at 457.635 kb on - strand, within GFF1796 at 457.823 kb on + strand, within GFF1796 at 457.823 kb on + strand, within GFF1796 at 457.893 kb on - strand, within GFF1796 at 457.893 kb on - strand, within GFF1796 at 457.920 kb on - strand, within GFF1796 at 458.033 kb on + strand, within GFF1796 at 458.033 kb on + strand, within GFF1796 at 458.033 kb on + strand, within GFF1796 at 458.033 kb on + strand, within GFF1796 at 458.033 kb on + strand, within GFF1796 at 458.034 kb on - strand, within GFF1796 at 458.034 kb on - strand, within GFF1796 at 458.034 kb on - strand, within GFF1796 at 458.034 kb on - strand, within GFF1796 at 458.034 kb on - strand, within GFF1796 at 458.034 kb on - strand, within GFF1796 at 458.066 kb on + strand, within GFF1796 at 458.189 kb on + strand, within GFF1796 at 458.189 kb on + strand, within GFF1796 at 458.189 kb on + strand, within GFF1796 at 458.189 kb on + strand, within GFF1796 at 458.189 kb on + strand, within GFF1796 at 458.189 kb on + strand, within GFF1796 at 458.190 kb on - strand, within GFF1796 at 458.190 kb on - strand, within GFF1796 at 458.190 kb on - strand, within GFF1796 at 458.447 kb on + strand, within GFF1796 at 458.447 kb on + strand, within GFF1796 at 458.489 kb on + strand, within GFF1796 at 458.489 kb on + strand, within GFF1796 at 458.490 kb on - strand, within GFF1796 at 458.490 kb on - strand, within GFF1796 at 458.490 kb on - strand, within GFF1796 at 458.516 kb on + strand, within GFF1796 at 458.516 kb on + strand, within GFF1796 at 458.516 kb on + strand, within GFF1796 at 458.516 kb on + strand, within GFF1796 at 458.516 kb on + strand, within GFF1796 at 458.517 kb on - strand, within GFF1796 at 458.517 kb on - strand, within GFF1796 at 458.517 kb on - strand, within GFF1796 at 458.517 kb on - strand, within GFF1796 at 458.517 kb on - strand, within GFF1796 at 458.517 kb on - strand, within GFF1796 at 458.732 kb on + strand, within GFF1796 at 458.732 kb on + strand, within GFF1796 at 458.733 kb on - strand, within GFF1796 at 458.733 kb on - strand, within GFF1796 at 458.733 kb on - strand, within GFF1796 at 458.733 kb on - strand, within GFF1796 at 458.733 kb on - strand, within GFF1796 at 458.733 kb on - strand, within GFF1796 at 459.032 kb on + strand at 459.033 kb on - strand at 459.244 kb on + strand at 459.244 kb on + strand at 459.276 kb on + strand at 459.277 kb on - strand at 459.291 kb on - strand at 459.312 kb on + strand at 459.313 kb on - strand at 459.329 kb on - strand at 459.332 kb on + strand at 459.332 kb on + strand at 459.332 kb on + strand at 459.332 kb on + strand at 459.333 kb on - strand at 459.338 kb on + strand at 459.339 kb on - strand at 459.339 kb on - strand at 459.403 kb on + strand at 459.404 kb on - strand at 459.404 kb on - strand at 459.404 kb on - strand at 459.404 kb on - strand at 459.404 kb on - strand at 459.404 kb on - strand at 459.404 kb on - strand at 459.404 kb on - strand at 459.716 kb on + strand, within GFF1797 at 459.998 kb on + strand, within GFF1797 at 459.999 kb on - strand, within GFF1797 at 460.085 kb on + strand, within GFF1797 at 460.086 kb on - strand, within GFF1797 at 460.086 kb on - strand, within GFF1797 at 460.086 kb on - strand, within GFF1797 at 460.086 kb on - strand, within GFF1797 at 460.086 kb on - strand, within GFF1797 at 460.139 kb on + strand, within GFF1797 at 460.140 kb on - strand, within GFF1797 at 460.181 kb on + strand, within GFF1797
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 455,935 + -0.5 456,068 + -1.0 456,068 + -0.4 456,068 + +0.3 456,068 + +0.6 456,068 + -0.5 456,068 + -1.1 456,068 + -0.6 456,069 - -2.6 456,069 - +0.3 456,069 - -0.1 456,069 - +0.5 456,069 - +2.0 456,069 - +0.0 456,069 - -0.1 456,170 + GFF1795 0.19 +1.0 456,179 + GFF1795 0.20 +0.2 456,179 + GFF1795 0.20 -0.1 456,179 + GFF1795 0.20 -0.5 456,179 + GFF1795 0.20 -0.0 456,266 + GFF1795 0.31 -0.5 456,266 + GFF1795 0.31 -0.3 456,267 - GFF1795 0.31 +0.8 456,267 - GFF1795 0.31 -0.2 456,267 - GFF1795 0.31 -0.5 456,600 - GFF1795 0.73 +0.3 456,600 - GFF1795 0.73 +0.6 456,682 + GFF1795 0.83 +0.4 456,683 - GFF1795 0.83 +0.5 456,884 + -0.5 456,884 + +0.0 456,884 + -0.1 456,884 + -0.9 456,885 - -0.6 456,885 - -0.1 456,885 - -1.7 456,885 - -0.8 457,043 + +0.3 457,043 + -0.4 457,043 + -1.2 457,043 + -0.1 457,043 + +1.0 457,043 + -0.3 457,044 - +0.2 457,044 - +0.5 457,044 - -0.1 457,044 - -0.0 457,044 - -1.0 457,253 + GFF1796 0.16 -1.0 457,253 + GFF1796 0.16 -0.3 457,253 + GFF1796 0.16 +1.0 457,253 + GFF1796 0.16 -0.5 457,254 - GFF1796 0.16 +0.5 457,254 - GFF1796 0.16 -0.3 457,634 + GFF1796 0.33 -0.4 457,634 + GFF1796 0.33 -0.3 457,634 + GFF1796 0.33 -0.5 457,634 + GFF1796 0.33 +0.8 457,635 - GFF1796 0.33 -0.1 457,635 - GFF1796 0.33 +0.5 457,635 - GFF1796 0.33 -0.0 457,823 + GFF1796 0.41 -0.3 457,823 + GFF1796 0.41 -0.6 457,893 - GFF1796 0.44 -0.5 457,893 - GFF1796 0.44 +1.2 457,920 - GFF1796 0.45 -0.3 458,033 + GFF1796 0.50 +0.6 458,033 + GFF1796 0.50 +1.1 458,033 + GFF1796 0.50 +0.5 458,033 + GFF1796 0.50 +0.4 458,033 + GFF1796 0.50 -0.8 458,034 - GFF1796 0.50 +0.7 458,034 - GFF1796 0.50 -2.4 458,034 - GFF1796 0.50 -1.3 458,034 - GFF1796 0.50 -0.6 458,034 - GFF1796 0.50 -1.7 458,034 - GFF1796 0.50 +0.1 458,066 + GFF1796 0.51 -0.1 458,189 + GFF1796 0.57 -0.3 458,189 + GFF1796 0.57 +1.5 458,189 + GFF1796 0.57 +1.3 458,189 + GFF1796 0.57 -0.0 458,189 + GFF1796 0.57 -0.2 458,189 + GFF1796 0.57 -0.3 458,190 - GFF1796 0.57 -0.9 458,190 - GFF1796 0.57 -1.0 458,190 - GFF1796 0.57 -1.3 458,447 + GFF1796 0.68 -0.1 458,447 + GFF1796 0.68 +0.0 458,489 + GFF1796 0.70 +0.5 458,489 + GFF1796 0.70 +0.3 458,490 - GFF1796 0.70 +0.5 458,490 - GFF1796 0.70 +1.0 458,490 - GFF1796 0.70 +1.4 458,516 + GFF1796 0.71 -1.0 458,516 + GFF1796 0.71 -0.5 458,516 + GFF1796 0.71 -0.6 458,516 + GFF1796 0.71 +0.0 458,516 + GFF1796 0.71 -0.3 458,517 - GFF1796 0.71 -0.6 458,517 - GFF1796 0.71 +0.5 458,517 - GFF1796 0.71 -0.2 458,517 - GFF1796 0.71 -0.1 458,517 - GFF1796 0.71 +0.7 458,517 - GFF1796 0.71 +0.6 458,732 + GFF1796 0.80 +1.4 458,732 + GFF1796 0.80 +0.0 458,733 - GFF1796 0.80 +0.4 458,733 - GFF1796 0.80 +2.0 458,733 - GFF1796 0.80 -0.6 458,733 - GFF1796 0.80 +0.0 458,733 - GFF1796 0.80 -1.4 458,733 - GFF1796 0.80 -0.9 459,032 + -0.8 459,033 - -0.2 459,244 + -0.1 459,244 + -0.4 459,276 + -0.5 459,277 - -0.4 459,291 - -0.4 459,312 + +0.8 459,313 - -3.4 459,329 - -0.4 459,332 + +0.1 459,332 + -0.6 459,332 + -1.6 459,332 + -0.7 459,333 - +0.2 459,338 + +0.7 459,339 - -0.3 459,339 - -0.8 459,403 + +1.2 459,404 - -0.5 459,404 - -0.5 459,404 - -1.1 459,404 - -1.5 459,404 - -1.1 459,404 - -1.1 459,404 - +0.7 459,404 - -0.8 459,716 + GFF1797 0.23 +0.5 459,998 + GFF1797 0.44 +0.5 459,999 - GFF1797 0.44 -0.3 460,085 + GFF1797 0.51 -0.3 460,086 - GFF1797 0.51 +0.0 460,086 - GFF1797 0.51 +0.2 460,086 - GFF1797 0.51 -2.2 460,086 - GFF1797 0.51 +0.3 460,086 - GFF1797 0.51 -1.2 460,139 + GFF1797 0.55 -1.0 460,140 - GFF1797 0.55 -0.3 460,181 + GFF1797 0.58 +0.0
Or see this region's nucleotide sequence