Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1637 and GFF1638 overlap by 4 nucleotides GFF1638 and GFF1639 overlap by 4 nucleotides
GFF1637 - Polyketide synthase modules and related proteins, at 260,237 to 264,835
GFF1637
GFF1638 - Siderophore biosynthesis non-ribosomal peptide synthetase modules, at 264,832 to 268,113
GFF1638
GFF1639 - Polyketide synthase modules and related proteins, at 268,110 to 271,196
GFF1639
Position (kb) 264
265
266
267
268
269 Strain fitness (log2 ratio) -1
0
1 at 263.878 kb on - strand, within GFF1637 at 264.319 kb on - strand, within GFF1637 at 264.432 kb on + strand at 264.456 kb on + strand at 264.556 kb on - strand at 265.143 kb on + strand at 265.346 kb on + strand, within GFF1638 at 265.643 kb on + strand, within GFF1638 at 265.697 kb on + strand, within GFF1638 at 265.697 kb on + strand, within GFF1638 at 265.697 kb on + strand, within GFF1638 at 265.698 kb on - strand, within GFF1638 at 265.698 kb on - strand, within GFF1638 at 265.698 kb on - strand, within GFF1638 at 265.698 kb on - strand, within GFF1638 at 265.799 kb on + strand, within GFF1638 at 265.808 kb on + strand, within GFF1638 at 265.809 kb on - strand, within GFF1638 at 266.061 kb on + strand, within GFF1638 at 266.136 kb on - strand, within GFF1638 at 266.232 kb on - strand, within GFF1638 at 266.232 kb on - strand, within GFF1638 at 266.232 kb on - strand, within GFF1638 at 266.405 kb on + strand, within GFF1638 at 266.685 kb on - strand, within GFF1638 at 266.808 kb on - strand, within GFF1638 at 266.858 kb on + strand, within GFF1638 at 266.859 kb on - strand, within GFF1638 at 266.859 kb on - strand, within GFF1638 at 266.894 kb on + strand, within GFF1638 at 266.894 kb on + strand, within GFF1638 at 266.894 kb on + strand, within GFF1638 at 266.894 kb on + strand, within GFF1638 at 266.894 kb on + strand, within GFF1638 at 266.894 kb on + strand, within GFF1638 at 267.244 kb on + strand, within GFF1638 at 267.534 kb on - strand, within GFF1638 at 267.534 kb on - strand, within GFF1638 at 267.543 kb on - strand, within GFF1638 at 267.599 kb on + strand, within GFF1638 at 268.043 kb on + strand at 268.044 kb on - strand at 268.044 kb on - strand at 268.044 kb on - strand at 268.781 kb on - strand, within GFF1639 at 268.781 kb on - strand, within GFF1639 at 268.894 kb on + strand, within GFF1639 at 269.057 kb on - strand, within GFF1639 at 269.057 kb on - strand, within GFF1639 at 269.065 kb on + strand, within GFF1639 at 269.066 kb on - strand, within GFF1639 at 269.070 kb on - strand, within GFF1639
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 263,878 - GFF1637 0.79 -0.4 264,319 - GFF1637 0.89 +1.0 264,432 + -0.4 264,456 + -0.7 264,556 - -0.3 265,143 + -0.7 265,346 + GFF1638 0.16 -0.0 265,643 + GFF1638 0.25 -0.6 265,697 + GFF1638 0.26 -0.6 265,697 + GFF1638 0.26 -0.9 265,697 + GFF1638 0.26 -1.7 265,698 - GFF1638 0.26 -0.4 265,698 - GFF1638 0.26 +0.2 265,698 - GFF1638 0.26 -0.2 265,698 - GFF1638 0.26 -1.1 265,799 + GFF1638 0.29 +0.7 265,808 + GFF1638 0.30 -0.7 265,809 - GFF1638 0.30 +1.0 266,061 + GFF1638 0.37 -0.8 266,136 - GFF1638 0.40 -0.6 266,232 - GFF1638 0.43 +0.8 266,232 - GFF1638 0.43 -0.5 266,232 - GFF1638 0.43 -0.5 266,405 + GFF1638 0.48 -0.7 266,685 - GFF1638 0.56 -0.2 266,808 - GFF1638 0.60 +0.5 266,858 + GFF1638 0.62 -0.5 266,859 - GFF1638 0.62 -1.3 266,859 - GFF1638 0.62 -1.6 266,894 + GFF1638 0.63 +1.0 266,894 + GFF1638 0.63 +0.0 266,894 + GFF1638 0.63 +1.0 266,894 + GFF1638 0.63 -0.7 266,894 + GFF1638 0.63 +0.5 266,894 + GFF1638 0.63 -0.6 267,244 + GFF1638 0.73 -1.0 267,534 - GFF1638 0.82 +0.3 267,534 - GFF1638 0.82 -0.1 267,543 - GFF1638 0.83 -0.8 267,599 + GFF1638 0.84 -0.1 268,043 + -0.5 268,044 - -1.0 268,044 - +0.7 268,044 - -0.2 268,781 - GFF1639 0.22 -0.8 268,781 - GFF1639 0.22 -0.3 268,894 + GFF1639 0.25 -0.3 269,057 - GFF1639 0.31 -0.4 269,057 - GFF1639 0.31 -0.3 269,065 + GFF1639 0.31 +1.6 269,066 - GFF1639 0.31 +0.2 269,070 - GFF1639 0.31 -0.5
Or see this region's nucleotide sequence