Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1510 and GFF1511 are separated by 8 nucleotides GFF1511 and GFF1512 are separated by 145 nucleotides GFF1512 and GFF1513 are separated by 328 nucleotides
GFF1510 - Oxidoreductase, at 103,307 to 104,797
GFF1510
GFF1511 - Transcriptional regulator, LysR family, at 104,806 to 105,795
GFF1511
GFF1512 - no description, at 105,941 to 106,351
GFF1512
GFF1513 - Cytochrome c551/c552, at 106,680 to 107,777
GFF1513
Position (kb) 104
105
106 Strain fitness (log2 ratio) -2
-1
0
1
2 at 103.923 kb on + strand, within GFF1510 at 103.923 kb on + strand, within GFF1510 at 103.923 kb on + strand, within GFF1510 at 103.923 kb on + strand, within GFF1510 at 103.923 kb on + strand, within GFF1510 at 103.923 kb on + strand, within GFF1510 at 103.923 kb on + strand, within GFF1510 at 103.924 kb on - strand, within GFF1510 at 103.924 kb on - strand, within GFF1510 at 103.924 kb on - strand, within GFF1510 at 103.924 kb on - strand, within GFF1510 at 104.268 kb on + strand, within GFF1510 at 104.268 kb on + strand, within GFF1510 at 104.268 kb on + strand, within GFF1510 at 104.268 kb on + strand, within GFF1510 at 104.269 kb on - strand, within GFF1510 at 104.397 kb on + strand, within GFF1510 at 104.397 kb on + strand, within GFF1510 at 104.592 kb on + strand, within GFF1510 at 104.592 kb on + strand, within GFF1510 at 104.592 kb on + strand, within GFF1510 at 104.592 kb on + strand, within GFF1510 at 104.593 kb on - strand, within GFF1510 at 104.593 kb on - strand, within GFF1510 at 104.850 kb on - strand at 105.004 kb on - strand, within GFF1511 at 105.602 kb on + strand, within GFF1511 at 105.602 kb on + strand, within GFF1511 at 105.603 kb on - strand, within GFF1511 at 105.603 kb on - strand, within GFF1511 at 105.603 kb on - strand, within GFF1511 at 105.603 kb on - strand, within GFF1511 at 105.603 kb on - strand, within GFF1511 at 105.603 kb on - strand, within GFF1511 at 105.603 kb on - strand, within GFF1511 at 105.663 kb on - strand, within GFF1511 at 105.666 kb on + strand, within GFF1511 at 105.869 kb on + strand at 105.869 kb on + strand at 105.884 kb on + strand at 105.884 kb on + strand at 105.884 kb on + strand at 105.884 kb on + strand at 105.885 kb on - strand at 105.885 kb on - strand at 105.885 kb on - strand at 105.885 kb on - strand at 105.885 kb on - strand at 105.907 kb on + strand at 105.907 kb on + strand at 105.908 kb on - strand at 106.121 kb on + strand, within GFF1512 at 106.121 kb on + strand, within GFF1512 at 106.122 kb on - strand, within GFF1512 at 106.197 kb on + strand, within GFF1512 at 106.197 kb on + strand, within GFF1512 at 106.198 kb on - strand, within GFF1512 at 106.198 kb on - strand, within GFF1512 at 106.198 kb on - strand, within GFF1512 at 106.298 kb on + strand, within GFF1512 at 106.298 kb on + strand, within GFF1512 at 106.298 kb on + strand, within GFF1512 at 106.298 kb on + strand, within GFF1512 at 106.299 kb on - strand, within GFF1512 at 106.299 kb on - strand, within GFF1512 at 106.572 kb on + strand at 106.572 kb on + strand at 106.584 kb on + strand at 106.615 kb on + strand at 106.615 kb on + strand at 106.616 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 103,923 + GFF1510 0.41 -0.1 103,923 + GFF1510 0.41 -0.3 103,923 + GFF1510 0.41 -0.1 103,923 + GFF1510 0.41 -0.1 103,923 + GFF1510 0.41 +1.4 103,923 + GFF1510 0.41 -0.4 103,923 + GFF1510 0.41 +0.2 103,924 - GFF1510 0.41 -0.1 103,924 - GFF1510 0.41 -0.4 103,924 - GFF1510 0.41 +0.3 103,924 - GFF1510 0.41 +0.4 104,268 + GFF1510 0.64 -0.3 104,268 + GFF1510 0.64 -0.3 104,268 + GFF1510 0.64 -1.6 104,268 + GFF1510 0.64 -0.2 104,269 - GFF1510 0.65 -1.8 104,397 + GFF1510 0.73 +0.7 104,397 + GFF1510 0.73 -0.5 104,592 + GFF1510 0.86 -0.8 104,592 + GFF1510 0.86 +0.1 104,592 + GFF1510 0.86 -0.7 104,592 + GFF1510 0.86 -1.0 104,593 - GFF1510 0.86 -1.0 104,593 - GFF1510 0.86 -1.3 104,850 - +1.3 105,004 - GFF1511 0.20 -0.7 105,602 + GFF1511 0.80 -1.4 105,602 + GFF1511 0.80 -0.7 105,603 - GFF1511 0.81 -1.0 105,603 - GFF1511 0.81 -0.9 105,603 - GFF1511 0.81 -0.7 105,603 - GFF1511 0.81 -1.6 105,603 - GFF1511 0.81 +0.6 105,603 - GFF1511 0.81 -0.4 105,603 - GFF1511 0.81 +0.6 105,663 - GFF1511 0.87 -0.1 105,666 + GFF1511 0.87 -0.7 105,869 + -0.6 105,869 + -1.3 105,884 + -0.3 105,884 + -1.6 105,884 + -0.7 105,884 + -1.2 105,885 - -0.7 105,885 - -0.0 105,885 - -0.2 105,885 - +0.3 105,885 - -0.0 105,907 + +0.9 105,907 + +0.1 105,908 - -2.2 106,121 + GFF1512 0.44 +0.7 106,121 + GFF1512 0.44 -0.1 106,122 - GFF1512 0.44 +1.4 106,197 + GFF1512 0.62 +2.0 106,197 + GFF1512 0.62 -0.5 106,198 - GFF1512 0.63 -0.4 106,198 - GFF1512 0.63 -0.1 106,198 - GFF1512 0.63 -0.8 106,298 + GFF1512 0.87 -0.1 106,298 + GFF1512 0.87 -0.7 106,298 + GFF1512 0.87 +0.2 106,298 + GFF1512 0.87 +0.3 106,299 - GFF1512 0.87 -1.3 106,299 - GFF1512 0.87 -0.7 106,572 + -0.3 106,572 + -0.5 106,584 + -0.5 106,615 + +0.3 106,615 + -1.5 106,616 - -0.3
Or see this region's nucleotide sequence