Strain Fitness in Variovorax sp. SCN45 around GFF1478

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
69,128	+		GFF1477	0.56	+2.0
69,129	-		GFF1477	0.56	+0.5
69,129	-		GFF1477	0.56	-0.3
69,129	-		GFF1477	0.56	+1.3
69,197	+		GFF1477	0.63	-0.3
69,237	-		GFF1477	0.67	-0.0
69,677	+				-0.6
69,678	-				-0.3
69,836	+		GFF1478	0.26	+1.7
70,238	+		GFF1478	0.72	-0.4
70,616	+				-1.6
70,773	-		GFF1479	0.17	-0.6
70,959	-		GFF1479	0.30	-1.4
70,959	-		GFF1479	0.30	-0.8