Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1391 and GFF1392 are separated by 16 nucleotides GFF1392 and GFF1393 are separated by 643 nucleotides
GFF1391 - Uncharacterized MFS-type transporter, at 737,913 to 739,493
GFF1391
GFF1392 - Monooxygenase, flavin-binding family, at 739,510 to 740,979
GFF1392
GFF1393 - hypothetical protein, at 741,623 to 742,501
GFF1393
Position (kb) 739
740
741 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 738.618 kb on + strand, within GFF1391 at 738.619 kb on - strand, within GFF1391 at 738.619 kb on - strand, within GFF1391 at 738.804 kb on + strand, within GFF1391 at 738.828 kb on + strand, within GFF1391 at 738.829 kb on - strand, within GFF1391 at 738.829 kb on - strand, within GFF1391 at 738.865 kb on - strand, within GFF1391 at 739.041 kb on + strand, within GFF1391 at 739.042 kb on - strand, within GFF1391 at 739.042 kb on - strand, within GFF1391 at 739.042 kb on - strand, within GFF1391 at 739.042 kb on - strand, within GFF1391 at 739.042 kb on - strand, within GFF1391 at 739.042 kb on - strand, within GFF1391 at 739.042 kb on - strand, within GFF1391 at 739.693 kb on + strand, within GFF1392 at 739.693 kb on + strand, within GFF1392 at 739.693 kb on + strand, within GFF1392 at 739.693 kb on + strand, within GFF1392 at 739.693 kb on + strand, within GFF1392 at 739.693 kb on + strand, within GFF1392 at 739.693 kb on + strand, within GFF1392 at 739.693 kb on + strand, within GFF1392 at 739.694 kb on - strand, within GFF1392 at 739.694 kb on - strand, within GFF1392 at 739.694 kb on - strand, within GFF1392 at 739.694 kb on - strand, within GFF1392 at 739.694 kb on - strand, within GFF1392 at 739.694 kb on - strand, within GFF1392 at 739.694 kb on - strand, within GFF1392 at 739.706 kb on - strand, within GFF1392 at 739.765 kb on + strand, within GFF1392 at 739.765 kb on + strand, within GFF1392 at 739.765 kb on + strand, within GFF1392 at 739.765 kb on + strand, within GFF1392 at 739.765 kb on + strand, within GFF1392 at 739.766 kb on - strand, within GFF1392 at 739.942 kb on + strand, within GFF1392 at 739.942 kb on + strand, within GFF1392 at 739.942 kb on + strand, within GFF1392 at 739.942 kb on + strand, within GFF1392 at 739.942 kb on + strand, within GFF1392 at 739.943 kb on - strand, within GFF1392 at 739.943 kb on - strand, within GFF1392 at 739.943 kb on - strand, within GFF1392 at 739.948 kb on + strand, within GFF1392 at 739.949 kb on - strand, within GFF1392 at 739.949 kb on - strand, within GFF1392 at 739.991 kb on - strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.149 kb on + strand, within GFF1392 at 740.150 kb on - strand, within GFF1392 at 740.150 kb on - strand, within GFF1392 at 740.150 kb on - strand, within GFF1392 at 740.150 kb on - strand, within GFF1392 at 740.150 kb on - strand, within GFF1392 at 740.150 kb on - strand, within GFF1392 at 740.150 kb on - strand, within GFF1392 at 740.150 kb on - strand, within GFF1392 at 740.150 kb on - strand, within GFF1392 at 740.221 kb on + strand, within GFF1392 at 740.222 kb on - strand, within GFF1392 at 740.344 kb on + strand, within GFF1392 at 740.374 kb on + strand, within GFF1392 at 740.374 kb on + strand, within GFF1392 at 740.375 kb on - strand, within GFF1392 at 740.623 kb on + strand, within GFF1392 at 740.623 kb on + strand, within GFF1392 at 740.623 kb on + strand, within GFF1392 at 740.623 kb on + strand, within GFF1392 at 740.624 kb on - strand, within GFF1392 at 740.624 kb on - strand, within GFF1392 at 740.638 kb on + strand, within GFF1392 at 740.638 kb on + strand, within GFF1392 at 740.638 kb on + strand, within GFF1392 at 740.639 kb on - strand, within GFF1392 at 740.639 kb on - strand, within GFF1392 at 740.639 kb on - strand, within GFF1392 at 740.639 kb on - strand, within GFF1392 at 740.639 kb on - strand, within GFF1392 at 740.639 kb on - strand, within GFF1392 at 740.639 kb on - strand, within GFF1392 at 740.719 kb on + strand, within GFF1392 at 740.719 kb on + strand, within GFF1392 at 740.720 kb on - strand, within GFF1392 at 740.830 kb on + strand, within GFF1392 at 740.831 kb on - strand, within GFF1392 at 740.831 kb on - strand, within GFF1392 at 740.891 kb on - strand at 740.978 kb on - strand at 740.978 kb on - strand at 740.995 kb on + strand at 740.996 kb on - strand at 740.996 kb on - strand at 740.996 kb on - strand at 740.996 kb on - strand at 740.996 kb on - strand at 741.023 kb on + strand at 741.024 kb on - strand at 741.024 kb on - strand at 741.061 kb on + strand at 741.061 kb on + strand at 741.062 kb on - strand at 741.062 kb on - strand at 741.062 kb on - strand at 741.062 kb on - strand at 741.062 kb on - strand at 741.062 kb on - strand at 741.236 kb on + strand at 741.236 kb on + strand at 741.704 kb on + strand at 741.705 kb on - strand at 741.705 kb on - strand at 741.705 kb on - strand at 741.857 kb on + strand, within GFF1393 at 741.857 kb on + strand, within GFF1393 at 741.857 kb on + strand, within GFF1393 at 741.858 kb on - strand, within GFF1393 at 741.858 kb on - strand, within GFF1393 at 741.869 kb on + strand, within GFF1393 at 741.869 kb on + strand, within GFF1393 at 741.870 kb on - strand, within GFF1393 at 741.870 kb on - strand, within GFF1393 at 741.911 kb on + strand, within GFF1393 at 741.911 kb on + strand, within GFF1393 at 741.911 kb on + strand, within GFF1393 at 741.912 kb on - strand, within GFF1393 at 741.958 kb on + strand, within GFF1393 at 741.959 kb on - strand, within GFF1393
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL remove 738,618 + GFF1391 0.45 +0.6 738,619 - GFF1391 0.45 +0.1 738,619 - GFF1391 0.45 -0.3 738,804 + GFF1391 0.56 +0.3 738,828 + GFF1391 0.58 -1.5 738,829 - GFF1391 0.58 +0.6 738,829 - GFF1391 0.58 -1.0 738,865 - GFF1391 0.60 +1.6 739,041 + GFF1391 0.71 +0.3 739,042 - GFF1391 0.71 +3.6 739,042 - GFF1391 0.71 -0.9 739,042 - GFF1391 0.71 +0.9 739,042 - GFF1391 0.71 +0.2 739,042 - GFF1391 0.71 -0.8 739,042 - GFF1391 0.71 +0.1 739,042 - GFF1391 0.71 -0.4 739,693 + GFF1392 0.12 +1.2 739,693 + GFF1392 0.12 +1.6 739,693 + GFF1392 0.12 -0.6 739,693 + GFF1392 0.12 -0.2 739,693 + GFF1392 0.12 -0.9 739,693 + GFF1392 0.12 +0.0 739,693 + GFF1392 0.12 +0.6 739,693 + GFF1392 0.12 -1.1 739,694 - GFF1392 0.13 +1.1 739,694 - GFF1392 0.13 -0.7 739,694 - GFF1392 0.13 -0.4 739,694 - GFF1392 0.13 +0.6 739,694 - GFF1392 0.13 -0.2 739,694 - GFF1392 0.13 -0.4 739,694 - GFF1392 0.13 +0.3 739,706 - GFF1392 0.13 -0.3 739,765 + GFF1392 0.17 +0.4 739,765 + GFF1392 0.17 +0.2 739,765 + GFF1392 0.17 -0.9 739,765 + GFF1392 0.17 -0.4 739,765 + GFF1392 0.17 +0.1 739,766 - GFF1392 0.17 -2.2 739,942 + GFF1392 0.29 -1.5 739,942 + GFF1392 0.29 -0.7 739,942 + GFF1392 0.29 -0.7 739,942 + GFF1392 0.29 +0.5 739,942 + GFF1392 0.29 +0.9 739,943 - GFF1392 0.29 -1.8 739,943 - GFF1392 0.29 -0.4 739,943 - GFF1392 0.29 -1.7 739,948 + GFF1392 0.30 -0.1 739,949 - GFF1392 0.30 -0.7 739,949 - GFF1392 0.30 +0.1 739,991 - GFF1392 0.33 -1.5 740,149 + GFF1392 0.43 -0.2 740,149 + GFF1392 0.43 +0.2 740,149 + GFF1392 0.43 +1.3 740,149 + GFF1392 0.43 +0.2 740,149 + GFF1392 0.43 +0.3 740,149 + GFF1392 0.43 -0.1 740,149 + GFF1392 0.43 -0.7 740,149 + GFF1392 0.43 +0.1 740,149 + GFF1392 0.43 -0.5 740,149 + GFF1392 0.43 -0.9 740,150 - GFF1392 0.44 -0.3 740,150 - GFF1392 0.44 -0.4 740,150 - GFF1392 0.44 +1.1 740,150 - GFF1392 0.44 -0.2 740,150 - GFF1392 0.44 -0.7 740,150 - GFF1392 0.44 -0.1 740,150 - GFF1392 0.44 +0.1 740,150 - GFF1392 0.44 +0.1 740,150 - GFF1392 0.44 +0.2 740,221 + GFF1392 0.48 +0.0 740,222 - GFF1392 0.48 +0.0 740,344 + GFF1392 0.57 +1.1 740,374 + GFF1392 0.59 +0.1 740,374 + GFF1392 0.59 -0.6 740,375 - GFF1392 0.59 +1.9 740,623 + GFF1392 0.76 -1.7 740,623 + GFF1392 0.76 +0.4 740,623 + GFF1392 0.76 -0.7 740,623 + GFF1392 0.76 +0.2 740,624 - GFF1392 0.76 +0.6 740,624 - GFF1392 0.76 +0.6 740,638 + GFF1392 0.77 +0.2 740,638 + GFF1392 0.77 -0.3 740,638 + GFF1392 0.77 +1.0 740,639 - GFF1392 0.77 +0.1 740,639 - GFF1392 0.77 +0.1 740,639 - GFF1392 0.77 +1.1 740,639 - GFF1392 0.77 +0.5 740,639 - GFF1392 0.77 -0.1 740,639 - GFF1392 0.77 +0.1 740,639 - GFF1392 0.77 -0.2 740,719 + GFF1392 0.82 -0.9 740,719 + GFF1392 0.82 -0.5 740,720 - GFF1392 0.82 -0.7 740,830 + GFF1392 0.90 -2.7 740,831 - GFF1392 0.90 +0.3 740,831 - GFF1392 0.90 -1.6 740,891 - -0.7 740,978 - -0.0 740,978 - -1.2 740,995 + +0.5 740,996 - +1.4 740,996 - +0.5 740,996 - -0.7 740,996 - +1.6 740,996 - -1.2 741,023 + +0.2 741,024 - +0.3 741,024 - -2.9 741,061 + -1.0 741,061 + -2.0 741,062 - -0.2 741,062 - -0.4 741,062 - +0.9 741,062 - -0.4 741,062 - +1.4 741,062 - +2.2 741,236 + -0.4 741,236 + +0.2 741,704 + -0.4 741,705 - +0.0 741,705 - -0.1 741,705 - -0.4 741,857 + GFF1393 0.27 -0.4 741,857 + GFF1393 0.27 +1.5 741,857 + GFF1393 0.27 -1.5 741,858 - GFF1393 0.27 +0.6 741,858 - GFF1393 0.27 -0.4 741,869 + GFF1393 0.28 +0.3 741,869 + GFF1393 0.28 -0.3 741,870 - GFF1393 0.28 -0.2 741,870 - GFF1393 0.28 -0.9 741,911 + GFF1393 0.33 -0.4 741,911 + GFF1393 0.33 +0.3 741,911 + GFF1393 0.33 +0.3 741,912 - GFF1393 0.33 -1.2 741,958 + GFF1393 0.38 -0.8 741,959 - GFF1393 0.38 -0.7
Or see this region's nucleotide sequence