Strain Fitness in Variovorax sp. SCN45 around GFF852

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
160,295	-		GFF851	0.69	+0.3
160,540	+				-0.5
160,540	+				-0.5
160,540	+				-0.3
160,540	+				-0.4
160,540	+				-0.2
161,039	-		GFF852	0.75	-0.6
161,203	-				+0.5
161,308	-		GFF853	0.16	+0.4
161,398	-		GFF853	0.24	-1.2
161,398	-		GFF853	0.24	-2.0
161,652	+		GFF853	0.45	-2.6
161,761	-		GFF853	0.54	-1.0
161,761	-		GFF853	0.54	-0.7
161,827	-		GFF853	0.60	+0.7
161,827	-		GFF853	0.60	+0.0
161,827	-		GFF853	0.60	+0.7
161,827	-		GFF853	0.60	+0.4
161,827	-		GFF853	0.60	+0.6
162,102	+		GFF853	0.83	+0.9