Strain Fitness in Variovorax sp. SCN45 around GFF76

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
92,622	+		GFF75	0.47	-1.0
92,622	+		GFF75	0.47	+0.1
92,623	-		GFF75	0.47	+0.5
92,623	-		GFF75	0.47	+0.4
92,925	+		GFF75	0.76	+0.6
92,926	-		GFF75	0.76	+0.1
92,926	-		GFF75	0.76	-0.5
92,926	-		GFF75	0.76	-0.8
92,926	-		GFF75	0.76	-0.7
92,926	-		GFF75	0.76	-0.2
92,970	+		GFF75	0.81	-0.9
92,970	+		GFF75	0.81	-0.6
92,971	-		GFF75	0.81	-0.1
93,024	+		GFF75	0.86	-0.2
93,024	+		GFF75	0.86	-0.6
93,024	+		GFF75	0.86	+0.2
93,025	-		GFF75	0.86	+0.2
93,025	-		GFF75	0.86	+1.1
93,909	-		GFF76	0.70	+0.7
93,909	-		GFF76	0.70	-0.5
93,909	-		GFF76	0.70	-1.7
93,911	+		GFF76	0.70	-0.9
93,911	+		GFF76	0.70	+0.9
93,911	+		GFF76	0.70	+0.5
93,911	+		GFF76	0.70	-2.1
93,912	-		GFF76	0.70	-0.2
93,912	-		GFF76	0.70	+0.5
93,912	-		GFF76	0.70	-2.7
94,080	-		GFF76	0.86	-0.7
94,080	-		GFF76	0.86	-0.1
94,109	+		GFF76	0.89	-0.8
94,121	+		GFF76	0.90	-0.4
94,121	+		GFF76	0.90	-0.1
94,121	+		GFF76	0.90	-1.6
94,121	+		GFF76	0.90	+0.2
94,121	+		GFF76	0.90	+0.3
94,122	-				-0.3
94,122	-				+0.5
94,122	-				-0.3
94,122	-				+0.7
94,147	-				-1.1
94,534	+		GFF77	0.39	-1.1
94,534	+		GFF77	0.39	+0.4
94,535	-		GFF77	0.39	+1.3
94,535	-		GFF77	0.39	+0.9